Query= MSMg01no393_i16.b1 MSMg01no393_i16.b1 CHROMAT_FILE:
MSMg01no393_i16.b1 PHD_FILE: MSMg01no393_i16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:31 2005
(538 letters)
>mm_chr10_88748205_88749142
Length = 938
Score = 1021 bits (528), Expect = 0.0
Identities = 534/536 (99%), Gaps = 1/536 (0%)
Strand = Plus / Plus
Query: 4 ggaattcaaggtgggaacctaaaggctggaaccgaaccagagac-acacaagaaggctgc 62
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 203 ggaattcaaggtgggaacctaaaggctggaaccgaaccagagaccacacaagaaggctgc 262
Query: 63 ttactggctcccttcccttgacttgtgcatctacccttcttagatattccaggcccacct 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ttactggctcccttcccttgacttgtgcatctacccttcttagatattccaggcccacct 322
Query: 123 gcccagggatggtactacccacagtgagctgagccctgatagatctattaaaaatcataa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gcccagggatggtactacccacagtgagctgagccctgatagatctattaaaaatcataa 382
Query: 183 aaatgctcagacacgtccacaggccaatctgatggaggcaattccccaattgaaatgcct 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aaatgctcagacacgtccacaggccaatctgatggaggcaattccccaattgaaatgcct 442
Query: 243 tccctggtatgtctaatttatattaactagacctgatctaatcgggagggaagcatgata 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tccctggtatgtctaatttatattaactagacctgatctaatcgggagggaagcatgata 502
Query: 303 acatggaagcctaattttgtcctgatctcagtgccagaactctaataaggtcatgggcca 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 acatggaagcctaattttgtcctgatctcagtgccagaactctaataaggtcatgggcca 562
Query: 363 ggccaataccctttcccctatgttctaggacagcatagtcagataaagcctgctggtgct 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ggccaataccctttcccctatgttctaggacagcatagtcagataaagcctgctggtgct 622
Query: 423 ataatattctctaaagctctatgctccaacagacctagagtctgggatcactctagtaga 482
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 agaatattctctaaagctctatgctccaacagacctagagtctgggatcactctagtaga 682
Query: 483 gtacaatgagatactagtatcatctgactaaccatatagactctgactctagacca 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gtacaatgagatactagtatcatctgactaaccatatagactctgactctagacca 738
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space: 489984
Effective search space used: 489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no393_i16.g1 MSMg01no393_i16.g1 CHROMAT_FILE:
MSMg01no393_i16.g1 PHD_FILE: MSMg01no393_i16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:31 2005
(341 letters)
>mm_chr10_88898558_88899298
Length = 741
Score = 619 bits (320), Expect = 0.0
Identities = 335/340 (98%)
Strand = Plus / Minus
Query: 1 tctattcttgaactattatcttagagaagcacatcaaaatggcgaagcatctttgatgca 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 540 tctattcttgaacttttatcttagagaagcacatcaaaatggcgaagcatctttggtgca 481
Query: 61 cactgcaggcctacagactagtagacgcctctgttcttactgcagtttcggcttggcacc 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 480 cactgcaggcctacagactagtagacgcctctgttcttattgcagtttcggcttggcacc 421
Query: 121 cggcccgctccttgcagcttatatgaactggcagtcatctggaggctcggtgctatgtag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 cggcccgctccttgcagcttatatgaactggcagtcatctggaggctcggtgctatgtag 361
Query: 181 tagtagtcttcctcctgccccctttcctggaagaaacttaccttccttgtttgccattta 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 360 tagtagtcttcctcctgccccctttcctggaagaagcttaccttccttgtttgccattta 301
Query: 241 ggtacttcctcccggtttaaatctggattgtgtcattggactttaagtccttcacgtcac 300
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 300 ggtacttcctcccggtttaaatctggattgtgtcatgggactttaagtccttcacgtcac 241
Query: 301 gttttataatgtgggggtggggaatacagcatactgtgtg 340
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gttttataatgtgggggtggggaatacagcatactgtgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
