TTTATTCCCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXCGCGGAATTCCACAGTTACCAGGATGATATCCAGCCGTTACTTTG
CAGTTGCAATGTAAACACGGGTGTTGTTCACAGCAATAACCGATGCTTGC
AGTTCCTTCATCTTTTTGTTGAGATCATTACTCCAATTTCCTAGCAGCAT
CGCACCAATTGCATGCAACAGTTTTGCAGCTCTGTAAAAATTCTGATAGT
GAACAGAGTTTACAAACATTCCTGACTTATGAATAATGCAGGAATCAAAC
ACTAACTGCTCCAAAATATTCACCTGTTCCTGCAACCAATCCACTCTTTG
GTTAACCATAAGGATACCAGCTTTCAAATTTGTATTAATTTGCTCTTGTA
TGGCAAAAGCACTGGCAGTATTAGAGGATACATCATTGGGAACTGAAACA
GTTCCAACTGAATTAGTATACAACTGCCTCCACCCTAAATGGCATTGGCA
GAGGGAGTGCTTTCACTATTCCCCATAACAGTCTTTCTTGGGATGATACC
ACTTGCAGGTGCATCACGATCAGGTAGAGGGTCTTCAGGTGTATCATCTT
CGTCCACTTTGCATTCTCTCCCCAGCCTTTGTCAGTCAACCTGGAAATAA
AACTGTGGTCCTCTTAATCCTTTGGAACACCCCCGAACGGTTACCAAATA
CCCCCGGAGGGGAAATTTTTCACTTTTGTGCGGGAGAAAATCCTTTCCTA
TAAAAAA

NNTTTTTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACAGACCAATGAATT
GTTCCATTAGAAGCCAACTTTCCAGCAGGTAGCAGCAGCTCCAACTGCTG
TCTCCAAAGGCAGTTAAACAAAAGTAACCTGAAGAGGCAGGTGAACTGCT
CCTGGTCCCACCAAGGTGACTTTGGTTTCTGATGGGAGGGGGCAATTACA
TGCTGTGAGAACTCTGTTCTGTTGATGTGCTCACCCACCAAAGCACACCA
CTTGGAAAGACCAGGAATGAGTTCCTCTTCCAAAATCCCTCCTCTTGCAT
GTGGTGTTCATTCCATGGGTGTGGGGAGTAGGCTCTATTCCTTGGGTACT
CTGTTTCTATGTGAGGTGACACACAGTGATCACTCTCTCCTACCTTTCCC
AGATGATTGAGACTCCTAATCTAGACATTATTTTTTTTTCAATCTGTGAA
GGCAGATATGGTTGTTTGTGAACATTACAGTTTGCATGGACACTTCATAT
ATGTAATACATCAGAGGACAGAAGAGGATACCGCAGCATATGCTGCTGGG
ATTACAGGGAGGATGAGAAAGAAAGAGGCGGTACGCAGCGAAGAGGAAAA
GAAAGAACCCCTCACTGATACTGATATACAGACAAATTGCCATTCCTATA
AGGGGGAAGTTTCTCCTTCAAAAAATTAACGTTCCATACATCCATTAATA
TTAG

Query= MSMg01no394_e09.b1 MSMg01no394_e09.b1 CHROMAT_FILE:
MSMg01no394_e09.b1 PHD_FILE: MSMg01no394_e09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:36 2005
         (467 letters)



>mm_chr10_7884940_7885806
          Length = 867

 Score =  424 bits (219), Expect = e-123
 Identities = 409/479 (85%), Gaps = 21/479 (4%)
 Strand = Plus / Plus

                                                                       
Query: 2   ggatgatatccagccgttactttgcagttgcaatgtaaacacgggtgttgttcacagcaa 61
           ||||||| |||| || || ||||| ||||||||| |  ||||||||||||||||  ||||
Sbjct: 193 ggatgatctccatccattgctttgtagttgcaatctccacacgggtgttgttcatggcaa 252

                                                                       
Query: 62  taaccgatgcttgcagttccttcatctttttgttgagatcattactccaatttcctagca 121
            ||  |||||| ||| ||||||||||||| ||| |||||||| |||||||||||||||||
Sbjct: 253 caattgatgctcgcaattccttcatctttgtgtcgagatcatgactccaatttcctagca 312

                                                                       
Query: 122 gcatcgcaccaattg--catgcaacagttttgcagctct-gtaaaaattctgatag-tga 177
           |||| ||||||||||  ||||  |||| ||| ||||||| | |||||||||||| | |||
Sbjct: 313 gcattgcaccaattgcacatg--acagatttacagctctag-aaaaattctgat-gctga 368

                                                                       
Query: 178 acagagtttacaaacattcctgacttatgaataatgcaggaatcaaacactaac------ 231
           |||||| ||||| ||||||||| | ||||| ||||||||||| |||| ||||||      
Sbjct: 369 acagaggttacacacattcctgccatatgagtaatgcaggaagcaaatactaacttccaa 428

                                                                       
Query: 232 ---tgctccaaaatattcacctgttcctgcaaccaatccactctttggttaaccataagg 288
              | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 atatactccaaaatattcatctgttcctgcaaccaatccactctttggttaaccataagg 488

                                                                       
Query: 289 ataccagctttcaaatttgtattaatttgctcttgta-tggcaaaagcactggcagtatt 347
           |||||||| ||||||||||||||||||  |||   || || |||| ||||||||||||||
Sbjct: 489 ataccagcattcaaatttgtattaattccctcccatactgccaaa-gcactggcagtatt 547

                                                                       
Query: 348 agaggatacatcattgggaactgaaacagttccaactgaattagtatacaactgcctcca 407
           |||||| | ||||  | |||||||| ||||||| |||||||||||||||| |||||||||
Sbjct: 548 agaggacagatcaccgagaactgaagcagttcccactgaattagtatacatctgcctcca 607

                                                                      
Query: 408 ccctaaatggcattggcagagggag-tgctttcactattccccataacagtctttcttg 465
           | |||| ||||| ||| |||||| | |||||||||||||||||||||||||||||||||
Sbjct: 608 cactaagtggcactggtagaggg-gatgctttcactattccccataacagtctttcttg 665


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space:   391649
Effective search space used:   391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)