Query= MSMg01no394_h02.b1 MSMg01no394_h02.b1 CHROMAT_FILE:
MSMg01no394_h02.b1 PHD_FILE: MSMg01no394_h02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:49 2005
(343 letters)
>mm_chr10_5306882_5307624
Length = 743
Score = 569 bits (294), Expect = e-166
Identities = 333/350 (95%), Gaps = 7/350 (2%)
Strand = Plus / Plus
Query: 1 aaacaattgcatag-------tcaaacaaaacaaatctgttgaatttctgtgatgaaaca 53
|||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 194 aaacaattgcatagaaatgagtcaaacaaaacaaatctgttgaatttctgtgatgaaaca 253
Query: 54 cttgccagtggcctctgattttgttctgggctggtgagtgcacagacattgtcccttact 113
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 254 cttgccagtggcctctgattttgttctgggctggtgagtgcacagacattgtcccttaat 313
Query: 114 tacaggtctggttcttagacatcctccctcacagagatgtactctcttgcagaccctcga 173
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 314 tacaggtctggttcttagacatcctccctcacagagatgtactcccttgcagaccctcga 373
Query: 174 gtgtcccctgcatacctggggctgcatttccttttagtagctctgtaactcctgtgattt 233
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 374 gtgtcccctgcagacctggggctgcatttccttttagtagctctgtaattcctgtgattt 433
Query: 234 ttgcctggagaatatgataacatgtttcttctccgaacaaagcctcctgggataatgtgc 293
||| |||||||| |||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 434 ttgtctggagaacatgaaaacatgtttcttcttcgaacaaagcctcctgggataatgtgc 493
Query: 294 atgctccctttgtgctcccatgctctgtagaatatgctattcattccata 343
|||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 494 atgctccctttgtgttcccatgctctgtagaatatgctattcatttcata 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no394_h02.g1 MSMg01no394_h02.g1 CHROMAT_FILE:
MSMg01no394_h02.g1 PHD_FILE: MSMg01no394_h02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:50 2005
(433 letters)
>mm_chr10_5395829_5396660
Length = 832
Score = 731 bits (378), Expect = 0.0
Identities = 417/430 (96%), Gaps = 1/430 (0%)
Strand = Plus / Minus
Query: 4 aggtgattctttggtttttttttccatgtgacttttaaaattaatacccatcagaatgtt 63
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 632 aggtgattctttggttttttttt-catgtgacttttaaaattaatacccatcagaatgtt 574
Query: 64 tgtcattacagcacatatactgtttagggagcattgatatgtctattggttgaatcttgc 123
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 tttcattacagcacatatactgtttagggagcattgatatgtctattggttgaatcttgc 514
Query: 124 taccagaagcaaactcttcctttttattgtttaatctattttgtgtgcatgccttttgga 183
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 513 taccagaagcaaactcttcctttttattgtttaatctactttgtgtgcatgccttttgga 454
Query: 184 agtatttttaagcatccttgaatatgttttgcacataaggattattgctatttattggac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 agtatttttaagcatccttgaatatgttttgcacataaggattattgctatttattggac 394
Query: 244 ataagaacataatattatgtagacaaatacaatatttctaacttattatatactacatat 303
|||||||| ||||||||||||| |||||||| ||| |||||||||||||| |||||||||
Sbjct: 393 ataagaacgtaatattatgtaggcaaatacagtatctctaacttattatacactacatat 334
Query: 304 atgatgtataaacatcataaatagttcttcaattctttgtttcagatggatattctctat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 atgatgtataaacatcataaatagttcttcaattctttgtttcagatggatattctctat 274
Query: 364 attgaccaacaatagacttttgctgccttcataaacttcttatacatctatagatactac 423
||||||||| |||||||||||| || ||||||||||||||||| ||||||||||||||||
Sbjct: 273 attgaccaataatagacttttgttgtcttcataaacttcttatgcatctatagatactac 214
Query: 424 tctgcttaat 433
|| |||||||
Sbjct: 213 tccgcttaat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 832
Length adjustment: 9
Effective length of query: 424
Effective length of database: 823
Effective search space: 348952
Effective search space used: 348952
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
