Query= MSMg01no396_p23.b1 MSMg01no396_p23.b1 CHROMAT_FILE:
MSMg01no396_p23.b1 PHD_FILE: MSMg01no396_p23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:16 2005
(438 letters)
>mm_chr10_90048978_90049815
Length = 838
Score = 791 bits (409), Expect = 0.0
Identities = 429/437 (98%), Gaps = 4/437 (0%)
Strand = Plus / Minus
Query: 4 gaattccaagatca--tttccaaatattgagaagcataccctgccccctttttttcttgc 61
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 gaattccaagatcacctt--caaatattgagaagcataccctgccccctttttttcttgc 581
Query: 62 caaccatataaacacacattggccaataaacacagatgctctacaagtctttatgtggat 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 caaccatataaacacacattggccaataaacacagatgctctacaagtctttatgtggat 521
Query: 122 attctgatcaactttgctcagtaaaaaggaagataaaagcaaaaagaacctgaaacttaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 attctgatcaactttgctcagtaaaaaggaagataaaagcaaaaagaacctgaaacttaa 461
Query: 182 ctctgtgaaccaaagtgacagaaaccagtatacttatgtttgggaacttgtcataaacat 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ctctgtgaaccaaagtgacagaaaccagtatacttatgtttgggaacttgtcataaacat 401
Query: 242 tcatttaactttctcttcttatacacctctataatctgtatttagcatcctacaggctct 301
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 400 tcatttaactttctcttcttatacacctctataatctgtaactagcatcctacaggctct 341
Query: 302 tatttctctgtgttcttttaaattgcatggtttctggtgcatatggcagacacagctagc 361
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 340 tatttctctgtgttcttttaaattgcatggtttctgatgcatatggcagacacagctagc 281
Query: 362 ttacagaatctaagaagagggcagggaggcaattgtagtgatctatggggtattgtcact 421
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 280 ttacagaatctaagaagagggcagggaggcaattgcagtgatctatggggtattgtcact 221
Query: 422 ttgtcttttttgccttg 438
|||||||||||||||||
Sbjct: 220 ttgtcttttttgccttg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space: 355641
Effective search space used: 355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no396_p23.g1 MSMg01no396_p23.g1 CHROMAT_FILE:
MSMg01no396_p23.g1 PHD_FILE: MSMg01no396_p23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:16 2005
(425 letters)
>mm_chr10_89867579_89868403
Length = 825
Score = 768 bits (397), Expect = 0.0
Identities = 418/425 (98%)
Strand = Plus / Plus
Query: 1 tcctgtaaggtattattaaatttactatattaagaactgctgtagtctgtggatgtgatg 60
|||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 201 tcctgtgaggtattattaaatttactatattaagaactgatgtagtctgtggatatgatg 260
Query: 61 tcagttcttgggaagctggagtgggagaattatgagtttgaatccagcctggactataca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 tcagttcttgggaagctggagtgggagaattatgagtttgaatccagcctggactataga 320
Query: 121 gcaagagcctgtctcaaaattaaaaataaaactgctatccaagtaaaatttagaaactca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcaagagcctgtctcaaaattaaaaataaaactgctatccaagtaaaatttagaaactca 380
Query: 181 ctgaacttaagagaattcaaagaccttaccaaatatgaacctgtaatgaattaaacatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgaacttaagagaattcaaagaccttaccaaatatgaacctgtaatgaattaaacatat 440
Query: 241 catttaaattatggtgctagacaagtatagaaatgtgtggattttaatagacttcaagaa 300
|||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 441 catttaaattatggtgctagacgagtatagaaatgtatggattttaatagacttcaagaa 500
Query: 301 ctttaactcaatataaaagaattaatagtttataaagtttaagcatatcagaggaagaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 501 ctttaactcaatataaaagaattaatagtttataaagtttaagcatatcaggggaagaat 560
Query: 361 aaatgattgaacaaataatattgaaaatactcaataggttcaaaaagtaaaatacattct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaatgattgaacaaataatattgaaaatactcaataggttcaaaaagtaaaatacattct 620
Query: 421 ataag 425
|||||
Sbjct: 621 ataag 625
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space: 339456
Effective search space used: 339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
