Query= MSMg01no398_m02.b1 MSMg01no398_m02.b1 CHROMAT_FILE:
MSMg01no398_m02.b1 PHD_FILE: MSMg01no398_m02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:35 2005
(647 letters)
>mm_chr10_73648189_73649235
Length = 1047
Score = 1000 bits (517), Expect = 0.0
Identities = 591/643 (91%), Gaps = 44/643 (6%)
Strand = Plus / Plus
Query: 5 gaattcaaggcatgttcctgacatttatgtttattgaaaagtattgggcaaaatgtcttc 64
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaggcatgctactgacatttatgtttattgaaaagtattgggcaaaatgtcttc 264
Query: 65 ggatttatgaaatgatttcactagatcctagaagaaattatttttgtgagatattattta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggatttatgaaatgatttcactagatcctagaagaaattatttttgtgagatattattta 324
Query: 125 taattactgactaatgtttatatatatatatgtatatatatatatacatacacacacatt 184
|||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 325 taattactgactaatgttta------------tatatatatacatacatacacacacatt 372
Query: 185 atatatatacctatatatacctatgcacacacatatataaatatatatatatatataaat 244
||||||||||||||||||||||||||||||||
Sbjct: 373 atatatatacctatatatacctatgcacacac---------------------------- 404
Query: 245 atatatatataaatatatatatatatatatatcatatataggcatttcaagacattctga 304
| | |||| |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 405 --acacatat--atatatatatatatatatatcatatataggtatttcaagacattctga 460
Query: 305 ttccatagtccagagagctaactatggcttcaaactccaaactcatgataattcttctgc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ttccatagtccagagagctaactatggcttcaaactccaaactcatgataattcttctgc 520
Query: 365 ctgatctctagcgtcaaattacaacaatgagccaagtactagcccgttaaattttaaaat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ctgatctctagcgtcaaattacaacaatgagccaagtactagcccgttaaattttaaaat 580
Query: 425 tcaattctatggtatccagagacttcaaacagaaacaatactatatcctctttattttat 484
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 tcaattctatggtatctagagacttcaaacagaaacaatactatatcctctttattttat 640
Query: 485 tttacttgtattaccaattcttatatgaaaataatgttgaagttttgaaaatatcttaaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 tttacttgtattaccaattcttatatgaaaataatgttgaagttttgaaaatatcttaaa 700
Query: 545 agtgatattattacttttattgaaaattcattttaactgtcttttttcccctttaatcaa 604
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 701 agtgatattattacttttattgaaaattcattttaattgtcttttttcccctttaatcaa 760
Query: 605 tgtccctctgatgatttctaatggttcctctattaatttgttg 647
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 tgtccctctgatgatttctaatggttcctctattaatttgttg 803
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 75
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no398_m02.g1 MSMg01no398_m02.g1 CHROMAT_FILE:
MSMg01no398_m02.g1 PHD_FILE: MSMg01no398_m02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:35 2005
(641 letters)
>mm_chr10_73827418_73828458
Length = 1041
Score = 1170 bits (605), Expect = 0.0
Identities = 632/641 (98%)
Strand = Plus / Minus
Query: 1 gtcttgagtaaatcaaaatcttctcatgtaaataatctctgatttctttaaaacttaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gtcttgagtaaatcaaaatcttctcatgtaaataatctctgatttctttaaaacttaaat 782
Query: 61 tattttctcagctacaatcttagccaattagcatgggaacaccacaggctcatctccagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tattttctcagctacaatcttagccaattagcatgggaacaccacaggctcatctccagg 722
Query: 121 tcaatgggagccatatgaacttcacgggaaagcccactcctgatagctgcttgttgagtg 180
|||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 721 tcaatgggggccacgtgaacttcacgggaaagccgactcctgatagctgcttgttgagtg 662
Query: 181 tttcttgggaaataccgtttttgtttctttccatctattgaaatctcagggaaataatgt 240
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tttcttgggaaataccgattttgtttctttccatctattgaaatctcagggaaataatgc 602
Query: 241 tatttatatccttaagctttaatcagcaagatctggcagtacaggaagctgtaaacagct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tatttatatccttaagctttaatcagcaagatctggcagtacaggaagctgtaaacagct 542
Query: 301 caagatgttcaaacacactctgagatttatttaagacagaaaacacaacacagcaagatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 caagatgttcaaacacactctgagatttatttaagacagaaaacacaacacagcaagatt 482
Query: 361 attaaagacgggattggagagttccgcagacatctcagacagaagaagttgcccctgtaa 420
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 481 attaaagacgggattggagagttccgcagacatctcaggcagaagaagttgcctctgtaa 422
Query: 421 gtgttctaccttcaacccagatttcaaattagttctgcttttcagctaactcttaaagga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtgttctaccttcaacccagatttcaaattagttctgcttttcagctaactcttaaagga 362
Query: 481 gcaaaatggtttaaactatgcttaataaaacaaacaaaccccaaaccaactgaacaacaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcaaaatggtttaaactatgcttaataaaacaaacaaaccccaaaccaactgaacaacaa 302
Query: 541 aaccccttatgccacctacactagacaatgtacattcttctttgaatcccacaatagtct 600
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 301 aaccccttatgccacctacactagacaatgtacattcttctttgaatctcacaatagtct 242
Query: 601 cctggcataaagcaaatgagatctcacactctcatttacag 641
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cctggcataaagcaaatgagatctcacactctcatttacag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space: 650561
Effective search space used: 650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
