Query= MSMg01no405_c07.b1 MSMg01no405_c07.b1 CHROMAT_FILE:
MSMg01no405_c07.b1 PHD_FILE: MSMg01no405_c07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:02 2005
(448 letters)
>mm_chr10_84900325_84901172
Length = 848
Score = 673 bits (348), Expect = 0.0
Identities = 414/450 (92%), Gaps = 26/450 (5%)
Strand = Plus / Plus
Query: 1 gagctgccatgtgggtgctgggaattgaactgggccttctggaagaacagccagtgctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 gagctgccatgtgggtgctgggaattgaactgggccttctggaagaacagccagtgctct 282
Query: 61 gaaccactgagccatccctccaggccacttcatactctctctctctctctctctctctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gaaccactgagccatccctccaggccacttcatactctctctctctctctctctctctct 342
Query: 121 ctctctctctctctctctctctctctctctcaaaagccactttgtttatgtctccatgta 180
|||||||| |||||||||||||||||||||||||||||
Sbjct: 343 ctctctcta----------------------aaaagccactttgtttatgtctccatgta 380
Query: 181 gtagggacctctgggagctaaggtggatataatctgtcctttctcgctatggtgcag-ac 239
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||| | ||
Sbjct: 381 gtagggacctctgggagctacggtggatataatctgtcctttctcgctatagtgc-gtac 439
Query: 240 ccctggaggttatggtgtgaactcctattgggatcagtgacaacctagtagtgaaaaggg 299
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ccctggaggccatggtgtgaactcctattgggatcagtgacaacctagtagtgaaaaggg 499
Query: 300 agctaaatgct-tacatgaagaatttaacatgcaaaggaatagaggcggcctgcactttt 358
||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agctaaatg-tgtacaagaagaatttaacatgcaaaggaatagaggcggcctgcactttt 558
Query: 359 cctctttccttttctctacagctctcagatacaacagataattgagtcgtaagttcatgg 418
|||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 559 cctctttccttttctctatagctctcagatacaaccgataattgagtcgtaagttcatga 618
Query: 419 ccgcttcaccgtcattagtaccaccttgct 448
||||||||||| ||||||||||||||||||
Sbjct: 619 ccgcttcaccgccattagtaccaccttgct 648
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no405_c07.g1 MSMg01no405_c07.g1 CHROMAT_FILE:
MSMg01no405_c07.g1 PHD_FILE: MSMg01no405_c07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:02 2005
(331 letters)
>mm_chr10_85031701_85032431
Length = 731
Score = 611 bits (316), Expect = e-179
Identities = 327/331 (98%)
Strand = Plus / Minus
Query: 1 ccaggagagggtacttatgggcaatgaacctgagtcaccactgtgcacaacttctgtaaa 60
|||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 452 ccaggagaggatacttatgggcaacgaacctgagtcaccactgtgcacaacttctgtaaa 393
Query: 61 catgaccatgactctaggtgagcccagtctgtacctcagttgtcttcaacatgaacgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 392 catgaccatgactctaggtgagcccagtctgtacctcagttgtcttcaacatgaatgcag 333
Query: 121 caagtgaacttcatttattctagaacatcatttgacttcaagtcccatgcccagtggcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 caagtgaacttcatttattctagaacatcatttgacttcaagtcccatgcccagtggcag 273
Query: 181 aacagttcattgaaatgtatgtcttcaggggttaatcaataggcagaatataacggcatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aacagttcattgaaatgtatgtcttcaggggttaatcaataggcagaatataacggcatg 213
Query: 241 cccatgtatcattaggtatggctcccatagattcatgtgtttgaatgtttggcccatagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 cccatgtatcattaggtatggctcccatagattcatgtgtttgaatgtttggcccatagg 153
Query: 301 gagtgggattattattaaggaggtgtggnct 331
|||||||||||||||||||||||||||| ||
Sbjct: 152 gagtgggattattattaaggaggtgtggcct 122
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 731
Length adjustment: 9
Effective length of query: 322
Effective length of database: 722
Effective search space: 232484
Effective search space used: 232484
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
