Query= MSMg01no407_o15.b1 MSMg01no407_o15.b1 CHROMAT_FILE:
MSMg01no407_o15.b1 PHD_FILE: MSMg01no407_o15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:42 2005
(432 letters)
>mm_chr10_52612237_52613068
Length = 832
Score = 768 bits (397), Expect = 0.0
Identities = 418/425 (98%)
Strand = Plus / Minus
Query: 1 acacacatgacacatgtacaatgcatgcatgtaagcaaaatcactcaaattcataaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 acacacatgacacatgtacaatgcatgcatgtaagcaaaatcactcaaattcataaaaat 739
Query: 61 tctgaaagttttaattaaaaaattaataaatcataaaacaagatgttatgttagtatact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 tctgaaagttttaattaaaaaattaataaatcataaaacaagatgttatgttagtatact 679
Query: 121 cttgtaatcccaacattcaggaggtagataaaaacggatcagaagtccaagattatccag 180
||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 678 cttgtaatcccaacattaaggaggtagataaaaacgaatcagaagtccaagattatccag 619
Query: 181 ggcaacatgatcctctatttcaaaaataattaattagaacataattttcaacagtacaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 618 ggcaacatgatcctctatttcaaaaataattaattagaacataattttcaacattacaaa 559
Query: 241 aggaaagatactgcagctgtgagcatggtagtatctctgtgccctcacaaacctcctccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 aggaaagatactgcagctgtgagcatggtagtatctctgtgccctcacaaacctcctccc 499
Query: 301 attactttttaagaagatgagttttaaaaacaagacaaatatgtgttggaaagggaaata 360
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 498 attactttttaagaagatgagttttgaaaacaagacacatatgtgttggaaagggaaata 439
Query: 361 acagtggtggggtagaagaaaataccaggatatgtgtgtgtgtgtgtgtgtgtgtgtgtg 420
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 438 acagtggtggggtagaagaaaataccaggatatgtgtgtgtgtgtatgtatgtgtgtgtg 379
Query: 421 tgtgt 425
|||||
Sbjct: 378 tgtgt 374
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space: 348129
Effective search space used: 348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no407_o15.g1 MSMg01no407_o15.g1 CHROMAT_FILE:
MSMg01no407_o15.g1 PHD_FILE: MSMg01no407_o15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:42 2005
(197 letters)
>mm_chr10_52423496_52424093
Length = 598
Score = 360 bits (186), Expect = e-104
Identities = 195/198 (98%), Gaps = 1/198 (0%)
Strand = Plus / Plus
Query: 1 aggtgtgaagtggggg-tgctgatggatctcaataaggggatcctattttaaatttggga 59
|||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 aggtgtgaagtggggggtgctgatggatctcaataaggggatcctattttaaatctggga 260
Query: 60 gtgggagagagaataggaaagtaagggattgaatgtgatcacttgaagtttggtacctgg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgggagagagaataggaaagtaagggattgaatgtgatcacttgaagtttggtacctgg 320
Query: 120 accagtgtgtcccccctgagaaggagaccttttttccctcaggcaagtgacaacttgtgg 179
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 accagtgtgtcccccctgagaaggagacattttttccctcaggcaagtgacaacttgtgg 380
Query: 180 gggcttcagttttctcag 197
||||||||||||||||||
Sbjct: 381 gggcttcagttttctcag 398
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 197
Length of database: 598
Length adjustment: 8
Effective length of query: 189
Effective length of database: 590
Effective search space: 111510
Effective search space used: 111510
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
