NCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTCTACCTGACCCATGTCCACAGCACGGTTTGGTTATGGAAACT
AGGCTTCAATAAAGCCCTTTCCAGTGGCATCCTGAAATAGTAACTCCTTG
GCAAGACAAGAGTTAGTGGGGAAAGCATTGGACCAGAAATCCAGGAGATC
AAGGTTAAGTTTTAATTCAACCATTTCCTTAGAAGGGCTGATTTTCAACC
ATTAAACAAGTCACTTCACCCCCTTGCGTCTGTTGCCTTCGTTGTAACAC
AAATAATTTGGATTGGGAGGTACCCCTGGGTCTTCTGCCATTTGGAAAAC
AAAACAGGTCTCTGTCCCTGAGCATCTGGGATTTATCCTTCATGTATAAC
ACACTTGTTTTATACACCACACACACCACACACACACACACACACACACA
CACACACACACACACACACACACACACACCCTCCAATGTGTGTGTGAGCC
AGTGCCTGCTCTGGGTTTTTACCTAATATAGCAGTATTTCTTCAAGAGCA
AAGGACCCCTCTCCTCTTTTAACCTTTTTTGTGGACGATACATGTTTGGT
GAAAATCTGAATCTGGCTCCTTAATTAGGTGGAAAGGAAAAAGGGCTTTA
AGGAAGGCTTGTTTTAAGAAAAGTACCACCCGTGGTTTTTTTCTGCCCCC
CAGGATTTCCCTTTTTAACTAACAAATTCCTGGCAAAGGGGGGCCTTTTA
A

AGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCTGGAGAGCCAATGATCTTCTTCTATGTTGGAAG
GCTGAAGAAGCTGGGTTTGGGTGCCGACAAAGGACAGCAGCAGTAGCATC
AGTGAGGGGCATCCCCAGGGTAAGGAAGCTGTCAACACAGTAGGTAGACA
CGCTCACCAGCAGAGGCTACTGCACACTGGTGAAAGAACCAGCTTCCCCT
CAGACTCCCTTATAGCTGGACTGCCACAATGGTGCTGTCCACACAGTGGA
TATTTCCACTAGTTTACCTAACCTAGATGATACATCTGTGCCCAGAGGCT
TGCCTCTTGGATGATTCCAGACCTCTGCAAATGGATGCTATTAAGCATCA
CATAGGTAGGTCTCTGGCACTCCTCTTTGAAAGGATGTTTAAGGTCCATC
TGTTGCTTGCAATCCAAGCATATTTCAGTGCTGAAGAATGAATTCATGGA
GACATGAGTAGAAAAGCTGACTGCCATTTTATAAGTGAGAATTGACCTTT
AAGTTGGGGCTGGCATTTATTTTTGGGTTTTTTGGTTCCCAAGACAATTT
TTTCGGTGTAGCCCGGGTGGTCAAAAATTCTCTTTGAAAACAAGAGTGTG
CCTTGTATTCAAAAATTGGCGTGTTCTTGTCTCAACGGCGGGGTTTTATA
GGGGGTGGCCCAACTGCCCTTGCGGCCTTGAATTTATTTAAAGGGGGGTG
AGTCTTTTATTACTCCCTCAAACCTTTCTTTTTTTTTTTGGAG

Query= MSMg01no408_a24.b1 MSMg01no408_a24.b1 CHROMAT_FILE:
MSMg01no408_a24.b1 PHD_FILE: MSMg01no408_a24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:55 2005
         (438 letters)



>mm_chr10_87738807_87739644
          Length = 838

 Score =  733 bits (379), Expect = 0.0
 Identities = 404/413 (97%), Gaps = 3/413 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctctacctgacccatgtccacagcacggtttggttatggaaactaggcttcaat 63
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 204 ggaattctctacctgacccatgtccacagcacggtttggttatggaaactaggcctcaat 263

                                                                       
Query: 64  aaagccctttccagtggcatcctgaaatagtaactccttggcaagacaagagttagtggg 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 264 aaagccctttccagtggcatcctgaaatagtaactccttggcaagacaagagttactggg 323

                                                                       
Query: 124 gaaagcattggaccagaaatccaggagatcaaggttaagttttaattcaaccatttcctt 183
           ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 324 gaaagcactggaccagaaatccaggagatcaaggttaagtcttaattcaaccatttcctt 383

                                                                       
Query: 184 agaagggctgattttcaaccattaaacaagtcacttcacccccttgcgtctgttgccttc 243
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agaagggttgattttcaaccattaaacaagtcacttcacccccttgcgtctgttgccttc 443

                                                                       
Query: 244 gttgtaacacaaataatttggattgggaggtacccctgggtcttctgccatttggaaaac 303
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gttgtaacacaaatagtttggattgggaggtacccctgggtcttctgccatttggaaaac 503

                                                                       
Query: 304 aaaacaggtctctgtccctgagcatctgggatttatccttcatgtataacacacttgttt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaaacaggtctctgtccctgagcatctgggatttatccttcatgtataacacacttgttt 563

                                                                
Query: 364 tatacaccacacacaccacacacacacacacacacacacacacacacacacac 416
           |||||  ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 564 tatac--cacacacac-acacacacacacacacacacacacacacacacacac 613


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space:   355641
Effective search space used:   355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)