Query= MSMg01no409_g07.b1 MSMg01no409_g07.b1 CHROMAT_FILE:
MSMg01no409_g07.b1 PHD_FILE: MSMg01no409_g07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:44 2005
(505 letters)
>mm_chr10_10629686_10630590
Length = 905
Score = 928 bits (480), Expect = 0.0
Identities = 498/504 (98%), Gaps = 1/504 (0%)
Strand = Plus / Plus
Query: 1 ttaagagaaaacttgatccattctgagatgatttgattgaatgataattatgggcaggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaagagaaaacttgatccattctgagatgatttgattgaatgataattatgggcaggag 260
Query: 61 tttcagttttataaagagggtactctgagccaatcagaaagcttgctactttgcccacta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttcagttttataaagagggtactctgagccaatcagaaagcttgctactttgcccacta 320
Query: 121 aacattctcttttgaggtcatttttattagcaaataaataaatgaatgaacaaataaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacattctcttttgaggtcatttttattagcaaataaataaatgaatgaacaaataaata 380
Query: 181 tttcactaaggggaaagtaaagagctctcctactagatcacaaacaataccatggttgat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagcactaaggggaaagtaaagagctctcctactagatcacaaacaataccatggttgat 440
Query: 241 tggttgtca-ctaattattgaaaataacttcacaaaaaatttatattagagccttgcctt 299
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 441 tggttgtcaactaattattgaaaataacttcacaaaaaatttatattagagccttgtttt 500
Query: 300 gttcttaaagcaaaattaaaaatatattcataaagaatatatatccataactgtgtattg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gttcttaaagcaaaattaaaaatatattcataaagaatatatatccataactgtgtattg 560
Query: 360 attcagttctttcccttctccagttatgaacataaattatctttcagttaaattaattac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 attcagttctttcccttctccagttatgaacataaattatctttcagttaaattaattac 620
Query: 420 tttaggacaagaatcatttggggttttgttcatgaactatttatctgctgtttgctgcat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttaggacaagaatcatttggggttttgttcatgaactatttatctgctgtttgctgcat 680
Query: 480 gattgagtgacatagttttctcta 503
||||||||||||||||||||||||
Sbjct: 681 gattgagtgacatagttttctcta 704
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space: 443025
Effective search space used: 443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no409_g07.g1 MSMg01no409_g07.g1 CHROMAT_FILE:
MSMg01no409_g07.g1 PHD_FILE: MSMg01no409_g07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:44 2005
(251 letters)
>mm_chr10_10790163_10790813
Length = 651
Score = 470 bits (243), Expect = e-137
Identities = 249/251 (99%)
Strand = Plus / Minus
Query: 1 ttgaactaagcaatcctctgattacaacctcctgaagtagccgagggcctagcatatttc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ttgaactaagcaatcctcttattacaacctcctgaagtagccgagggcctagcatatttc 392
Query: 61 atagtgttttgcgtttgaagcgaaggaaagattaaaaaaaaagcaataagccaattgtca 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 391 atagtgttttgcgtttgaagcgaaggaaagatttaaaaaaaagcaataagccaattgtca 332
Query: 121 atagtatgttcaatagggaggccattcacagtaaagttcctaaggtgattttgagtattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 atagtatgttcaatagggaggccattcacagtaaagttcctaaggtgattttgagtattg 272
Query: 181 aaatagtgcagatactttacaacagacaaattgagacctctgttcctgaacaaataagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aaatagtgcagatactttacaacagacaaattgagacctctgttcctgaacaaataagca 212
Query: 241 caccacttgct 251
|||||||||||
Sbjct: 211 caccacttgct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
