TAATTTTATAGCCACACGAGGATCCTAAATTTACCCAATGTCCTCTCCCC
TTCTTCCCTCTCCCAGCAGTGACCCAGCAATGTATTAACGGACGCCCACG
GCCCCGATTCTAAAAACGAAAGTAGACTCACAACTCCACGCTCGCCCAGC
TTATAATTCTTTAAATGCCCATAAGCCCCCCCTTATGACGAGATGGAGCA
CCCGCCACCGAAGAACGCGACTAACAATAACAAAAAAACAGCCCCCCCCC
CCGCCCCCTCCTTCCCCCTCTCCCCTTTCTCCNCCTTTTTNNNNNCTCTC
AAGGGAGTAGAGCCCTTNTACTGCTCTNTCCCCTCCNTTTCCCCCCTCCC
CCTTTTTTCCNNNNNNNNNNNNNNNTNAAGAAGAGCNTGAAGGGGGCGCC
NCNCNNNNNNNNGGGCGGNNNCNCNNGNNNNNNNNNNNNCCTAGATAATA
AAAATTTTGGGCGGGGGCCCGGNNCCTAAATTTACGGGAACCCTCCAACC
TTAAATTAAGGTGGCGACAAAAAAAAGAGAAAATNCCCCGCCCGGGGGAA
AAAATTTTTCCAAAGGAAAGGTTTTTTTTCCTTTTCTCTTCTTGGACCAT
GAGANAGGGGTAAAATTTTTCCCCTTTTTGGGCCCCCCAAATCCCCTTTT
TGGCCCCCCAAGGAAATAAAAAAAATTTAAAAATGGGGTTTTTTTGGGGT
GTTCCCCCAAAATTCCACAAGGTAAAAAAGAGTGGGGGCGCCTTGTGAGA
AACAAACCACCCCCGGCTGTTGGAANAAAAAAAANTTTTCTCCCCCTCTT
TGGGACCAAGGGAGGAGTGAA

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAGGAGTTGGGACACATTGTTGGGGGGGG
CCATTGTTCTGGTTACCACAGAGGAACTATTAATAGTCACAGGAGACAAA
CAGAATACCCTGATCTTCAGGTAAGGCTAGCTGGAGCATGATGACGCCCT
GTTCAGAAACCATGTCTGGACAATGAAGGCACACATTCCACCTCAGATAC
CTGGCACTCCAGGGGTAGAATTTCTCAATCTATATTCTTTAGAGTAGATT
CTTACTCTCTCTAGACTTCAGGATGAGGGTTTGCCGTATGTAGTTTTTCA
GAAGATTAAATTGGAAGACATTATTGCTCAGCAGTGACCACAGACCATAG
GCTTCTCCCATTAAATGTATAGGATCAGTAATCCCTGCCTCAGTCTATTA
ACTTTTACCATTGGTTTTAAAATTGTATAACTATATGTAGCCCTTAGCAG
TTTGATATGAGTTCTTGCTAACTTAGCTCATGTTTGAAAAGCCAAACCTG
GGGTCTTACACATAATAATGTAGATGTATTACATAGTCATTTTTAATGGA
ATTCTTTGATTCCTTTCTTCCTTAAATATGTTTTTCAGGAAAAGCCCGAA
ACACCTAGGTATTGCAGGTTTTTAAAGTGGATTAATATGCTACTGTGGTG
CCAAATAATCTTCACCCACCTATCGG

Query= MSMg01no413_f04.g1 MSMg01no413_f04.g1 CHROMAT_FILE:
MSMg01no413_f04.g1 PHD_FILE: MSMg01no413_f04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:58 2005
         (484 letters)



>mm_chr10_52812331_52813217
          Length = 887

 Score =  895 bits (463), Expect = 0.0
 Identities = 477/483 (98%), Gaps = 3/483 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggagttgggacacattgtt---ggggggggccattgttctggttaccacagaggaacta 57
           ||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggagttgggacacattgttgggggggggggccattgttctggttaccacagaggaacta 260

                                                                       
Query: 58  ttaatagtcacaggagacaaacagaataccctgatcttcaggtaaggctagctggagcat 117
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaatagtcacaggagacaaacagaataccctgatcttcaggtaaggctagctggagcat 320

                                                                       
Query: 118 gatgacgccctgttcagaaaccatgtctggacaatgaaggcacacattccacctcagata 177
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatgacgccctgttcagaaaccatgtctggacaatgaaggcacacattccacctcagata 380

                                                                       
Query: 178 cctggcactccaggggtagaatttctcaatctatattctttagagtagattcttactctc 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctggcactccaggggtagaatttctcaatctatattctttagagtagattcttactctc 440

                                                                       
Query: 238 tctagacttcaggatgagggtttgccgtatgtagtttttcagaagattaaattggaagac 297
           ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 tctagacttcaagatgagggtttgccgtacgtagtttttcagaagattaaattggaagac 500

                                                                       
Query: 298 attattgctcagcagtgaccacagaccataggcttctcccattaaatgtataggatcagt 357
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attattgctcagcagtgcccacagaccataggcttctcccattaaatgtataggatcagt 560

                                                                       
Query: 358 aatccctgcctcagtctattaacttttaccattggttttaaaattgtataactatatgta 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatccctgcctcagtctattaacttttaccattggttttaaaattgtataactatatgta 620

                                                                       
Query: 418 gcccttagcagtttgatatgagttcttgctaacttagctcatgtttgaaaagccaaacct 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcccttagcagtttgatatgagttcttgctaacttagctcatgtttgaaaagccaaacct 680

              
Query: 478 ggg 480
           |||
Sbjct: 681 ggg 683


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 887
Length adjustment: 10
Effective length of query: 474
Effective length of database: 877
Effective search space:   415698
Effective search space used:   415698
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)