Query= MSMg01no414_p16.b1 MSMg01no414_p16.b1 CHROMAT_FILE:
MSMg01no414_p16.b1 PHD_FILE: MSMg01no414_p16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:13 2005
(497 letters)
>mm_chr10_91782153_91783049
Length = 897
Score = 953 bits (493), Expect = 0.0
Identities = 496/497 (99%)
Strand = Plus / Plus
Query: 1 tggatgctggactgacacgaaaatagtctcattcccagaaagtatggtaggggcatcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggatgctggactgacacgaaaatagtctcattcccagaaagtatggtaggggcatcctt 260
Query: 61 tgcaagctgcggtgggtatcattttcaaagctttcattgatactgagccatgatggggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcaagctgcggtgggtatcattttcaaagctttcattgatactgagccatgatggggag 320
Query: 121 gagtgatgaaaattcactggcacacatagtctctaagaagcttgagaagttcacgggcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagtgatgaaaattcactggcacacatagtctctaagaagcttgagaagttcacgggcat 380
Query: 181 ttcagtggtaattggaagaactctaatccaatgggtcttatgcacagctctccctgtgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcagtggtaattggaagaactctaatccaatgggtcttatgcacagctctccctgtgat 440
Query: 241 gggggaagacaatgatagttggaaggcagtttagggtgaattgtaaaatccaaagagcct 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggggaagacaatgaaagttggaaggcagtttagggtgaattgtaaaatccaaagagcct 500
Query: 301 ccttggcagccacatggaaagactcttatctcctgtagccagaaggtaggaaaagcggac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccttggcagccacatggaaagactcttatctcctgtagccagaaggtaggaaaagcggac 560
Query: 361 aatcaagccaggacttaaccataagggcttgaaatgctctcaggaggctgactcttcaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatcaagccaggacttaaccataagggcttgaaatgctctcaggaggctgactcttcaat 620
Query: 421 cccagcaactctatgataaggccagggcattctaactggaaaaaaaagtggaacaacaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cccagcaactctatgataaggccagggcattctaactggaaaaaaaagtggaacaacaat 680
Query: 481 aataacaaaaaacaaac 497
|||||||||||||||||
Sbjct: 681 aataacaaaaaacaaac 697
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space: 431969
Effective search space used: 431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no414_p16.g1 MSMg01no414_p16.g1 CHROMAT_FILE:
MSMg01no414_p16.g1 PHD_FILE: MSMg01no414_p16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:13 2005
(324 letters)
>mm_chr10_91965402_91966124
Length = 723
Score = 582 bits (301), Expect = e-171
Identities = 319/325 (98%), Gaps = 3/325 (0%)
Strand = Plus / Minus
Query: 1 tcacaaatgaaagaacaaatgaagcatgaccacgccctctgaataacatcaatttgaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tcacaaatgaaagaacaaatgaagcatgaccacgccctctgaataacatcaatttgaatt 420
Query: 61 tatctttaattttattaaagagacaataattatacctcagccattatatcagccactgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tatctttaattttattaaagagacaataattatacctcagccattatatcagccactgta 360
Query: 121 ctctacaaaagtgatgtggagcttactcgagctttgagttaatttattactttaaataac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ctctacaaaagtgatgtggagcttactcgagctttgagttaatttattactttaaataac 300
Query: 181 tgacatttgtttatcttcagagtattggtttctttagccactatagacagacagtgcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tgacatttgtttatcttcagagtattggtttctttagccactatagacagacagtgcttc 240
Query: 241 cggaattattg-agttaatgaccaagtgagtcattgtggcagtgtgtgtgtgtgtgtgtg 299
||||| | || || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 cggaa-aaatgcag-caatgaccaagtgagtcattgtggcagtgtgtgtgtgtgtgtgtg 182
Query: 300 tgtgtgtgtgtgtgtgtgtgtgtgt 324
|||||||||||||||||||||||||
Sbjct: 181 tgtgtgtgtgtgtgtgtgtgtgtgt 157
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 67
Number of extensions: 24
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 20
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 723
Length adjustment: 9
Effective length of query: 315
Effective length of database: 714
Effective search space: 224910
Effective search space used: 224910
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
