Query= MSMg01no415_c02.b1 MSMg01no415_c02.b1 CHROMAT_FILE:
MSMg01no415_c02.b1 PHD_FILE: MSMg01no415_c02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:25 2005
(510 letters)
>mm_chr10_119374767_119375676
Length = 910
Score = 971 bits (502), Expect = 0.0
Identities = 508/510 (99%)
Strand = Plus / Minus
Query: 1 gtcttatttgttaaaagatgatttcccctctggaaacatcaggttttaagggtgccctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 gtcttatttgttaaaagatgatttcccctctggaaacatcaggttttaagggtgccctct 651
Query: 61 ggatctcccccatacctttcagcctccacttacctcggatgacaaaaccaaaggtgttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 ggatctcccccatacctttcagcctccacttacctcggatgacaaaaccaaaggtgttgc 591
Query: 121 cttctttgtgcagcgtgacctccacagttcggaacataacactggatccttgtacagctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 cttctttgtgcagcgtgacctccacagttcggaacataacactggatccttgtacagctg 531
Query: 181 tgtacaggaatgagacgggaaaacatgagtctacgactataataacatttctattgtaat 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 tgtacgggaatgagacgggaaaacatgagtctacgactataataacatttctattgtaat 471
Query: 241 tgttttcaatgtgacataataggcttgtaagttatgttgcaaataatttattttgaagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tgttttcaatgtgacataataggcttgtaagttatgttgcaaataatttattttgaagaa 411
Query: 301 aagggcaataatctcaatgaagtctgagaggaaaaagaattgtaatggcattcagagagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 aagggcaataatctcaatgaagtctgagaggaaaaagaattgtaatggcattcagagagt 351
Query: 361 gtaagtagttatccgtataaatgacccatactgctccaagtagaagcaaacctcacagct 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gtaagtagttatccatataaatgacccatactgctccaagtagaagcaaacctcacagct 291
Query: 421 aattcccttccttctggatagacacattctagatagggggtgatgtttatattgcttaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 aattcccttccttctggatagacacattctagatagggggtgatgtttatattgcttaaa 231
Query: 481 ctctacagagcaagcaaggcaattttcaat 510
||||||||||||||||||||||||||||||
Sbjct: 230 ctctacagagcaagcaaggcaattttcaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 910
Length adjustment: 10
Effective length of query: 500
Effective length of database: 900
Effective search space: 450000
Effective search space used: 450000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no415_c02.g1 MSMg01no415_c02.g1 CHROMAT_FILE:
MSMg01no415_c02.g1 PHD_FILE: MSMg01no415_c02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:25 2005
(565 letters)
>mm_chr10_119231256_119232220
Length = 965
Score = 978 bits (506), Expect = 0.0
Identities = 551/566 (97%), Gaps = 2/566 (0%)
Strand = Plus / Plus
Query: 1 cctaccagcctgggctacagagtgagacactggcatgtccagtcaggtgtttctttgtgt 60
|||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 cctaccagcctgagctacagagtgagacactggcatgtccagtcaggtgtttttttgtgt 260
Query: 61 caaaagctgtggcctggttttaaatgtttctctgcatctatctgaatcctggctttaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaaagctgtggcctggttttaaatgtttctctgcatctatctgaatcctggctttaaca 320
Query: 121 gccctatctttcaccactcacccaagcatggcactcgtattatttcttttctcattggaa 180
|||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 gccctatcattcaccactcgcccaagcatggcactcatattatttcttttctcattggaa 380
Query: 181 aatatctcacagaagtgatacaagtgaggcagagtttattttgtttgggttcggagtttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatatctcacagaagtgatacaagtgaggcagagtttattttgtttgggttcggagtttg 440
Query: 241 gggctatttttcattgtggaggagaaatgaagtgaagagatcttggctgtgtttttagga 300
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggctacagtccattgtggaggagaaatgaagtgaagagatcttggctgtgtttttagga 500
Query: 301 gcataacgcaagtgtagttaagcagagagagatgaatctgggccttttacaggttttctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcataacgcaagtgtagttaagcagagagagatgaatctgggccttttacaggttttctt 560
Query: 361 ctttctgatcagtccaggacaacagtccaggggtggtgctgccaacttcctgaatggatc 420
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 561 ctttctgatcagtccaggacaacagtccaggggtggcgctgccaacttcctgaatggatc 620
Query: 421 ttcctagcccactgacatgctcagaggcatcctgtgctaggtggatctgcattcaatcac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttcctagcccactgacatgctcagaggcatcctgtgctaggtggatctgcattcaatcac 680
Query: 481 gttgacaatcccgagtaaccatcgaactaacagcccagattctcctatcttcctttctca 540
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||
Sbjct: 681 gttgacaatcccgagtaaccatcaaactaacagcccagattctcctatgttcctttcaca 740
Query: 541 catctattggtcatcc-accctgcag 565
||||||||||||| || |||||||||
Sbjct: 741 catctattggtca-cctaccctgcag 765
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space: 530025
Effective search space used: 530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
