Query= MSMg01no417_a08.b1 MSMg01no417_a08.b1 CHROMAT_FILE:
MSMg01no417_a08.b1 PHD_FILE: MSMg01no417_a08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:46 2005
(554 letters)
>mm_chr10_68303122_68304075
Length = 954
Score = 1048 bits (542), Expect = 0.0
Identities = 551/554 (99%)
Strand = Plus / Minus
Query: 1 tttttctccctccatagtgagtcactgtgctacctgcaagctgtaatctgatttcttttt 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 754 tttttctccctccatagtgagtcactgtgctacctgcaagccgtaatctgatttcttttt 695
Query: 61 aatttctgtggaaaataagattactaaagtagaggaaccagaaaaactactgttattatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 aatttctgtggaaaataagattactaaagtagaggaaccagaaaaactactgttattatt 635
Query: 121 gttcccaaaacaaaacaaacaaacaaatcccactggcagtgactgagaaacatctattca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 gttcccaaaacaaaacaaacaaacaaatcccactggcagtgactgagaaacatctattca 575
Query: 181 tccatatctcagaaccacaaaatccccattttaagttaaaaggtgtacttttctctgggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tccatatctcagaaccacaaaatccccattttaagttaaaaggtgtacttttctctgggt 515
Query: 241 tggaaggcacccaagctttctaatgtgaaaacgagatttcaaatgctatttttatcgatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tggaaggcacccaagctttctaatgtgaaaacgagatttcaaatgctatttttatcgatt 455
Query: 301 gtttggaggcccagtcaggtcctatggggtggttgtgagctaatctaggaacccagctct 360
|||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 454 gtttggaggcccagtcaggtcctatggggtggctgtgagctaatctaggaactcagctct 395
Query: 361 atctactgataaaaattatcttagtcaccaaatagcacctcgacaattggtctggaccct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 atctactgataaaaattatcttagtcaccaaatagcacctcgacaattggtctggaccct 335
Query: 421 ataatatcagtagatatgctagatatccattccattttgtaccatctgattttgatttgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ataatatcagtagatatgctagatatccattccattttgtaccatctgattttgatttgc 275
Query: 481 acaatgctctctgggttagcaatgatcctcttggaagagtgatggctcacctctggtgat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 acaatgctctctgggttagcaatgatcctcttggaagagtgatggctcacctctggtgat 215
Query: 541 agtggtgcaatgtg 554
||||||||||||||
Sbjct: 214 agtggtgcaatgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 954
Length adjustment: 10
Effective length of query: 544
Effective length of database: 944
Effective search space: 513536
Effective search space used: 513536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no417_a08.g1 MSMg01no417_a08.g1 CHROMAT_FILE:
MSMg01no417_a08.g1 PHD_FILE: MSMg01no417_a08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:46 2005
(474 letters)
>mm_chr10_68130755_68131629
Length = 875
Score = 801 bits (414), Expect = 0.0
Identities = 420/422 (99%), Gaps = 1/422 (0%)
Strand = Plus / Plus
Query: 54 ttctttctttctttctttctttctttctttctttctttctttctttctttctttccttca 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ttctttctttctttctttctttctttctttctttctttctttctttctttctttccttca 313
Query: 114 gaaagtcagagttggatcctctttgggctacttttaatcaaatttggaatttgtaaagtt 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gaaagtcagagttggatcctctttgggctacttttaatcaaatttggaatttgtaaagtt 373
Query: 174 tgactggataggtcatctcctcactggaagcctccacacttcttgctaatttagccccat 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tgactggataggtcatctcctcactggaagcctccacacttcttgctaatttagccccat 433
Query: 234 gtcctctagctttctgaactataaaacaccactgaagtggttcttacatctgaaacactt 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gtcctctagctttctgaactataaaacaccactgaagtggttcttacatctgaaacactt 493
Query: 294 tctatctaatagtcatagagctttgtctagggctggctaagataaatagctgtagcaatt 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tctatctaatagtcatagagctttgtctagggctggctaagataaatagctgtagcaatt 553
Query: 354 tcaaggtacttaaagtcacatttcttgataatctctgaattttcagggaccattagagat 413
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 554 tcaaggtacttaaagtcacatttcttgataatctcggaattttcagggaccattagagat 613
Query: 414 ccctgtgtgaatcttcgaataatgaaaagtacattttagcagag-tttttttttttttag 472
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 614 ccctgtgtgaatcttcgaataatgaaaagtacattttagcagagatttttttttttttag 673
Query: 473 gt 474
||
Sbjct: 674 gt 675
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 65
Number of extensions: 27
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's gapped: 26
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 875
Length adjustment: 10
Effective length of query: 464
Effective length of database: 865
Effective search space: 401360
Effective search space used: 401360
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
