Query= MSMg01no417_h04.b1 MSMg01no417_h04.b1 CHROMAT_FILE:
MSMg01no417_h04.b1 PHD_FILE: MSMg01no417_h04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:20 2005
(461 letters)
>mm_chr10_119189937_119190800
Length = 864
Score = 812 bits (420), Expect = 0.0
Identities = 449/461 (97%), Gaps = 5/461 (1%)
Strand = Plus / Plus
Query: 5 gaattccattcgaatgttttcacctcctttgctcgtcgctcactgccttgagttaactat 64
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaatttcattccaatgttttcacctcctttgctcgtcgctcactgccttgagttaactat 264
Query: 65 ttttacttgtgaaaatatagataataaatttgactgacattttctctttatttttttttc 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 265 ttttacttgtgaaaatatagataataaatttgactgacattttctctttatttttttt-c 323
Query: 125 tttattgcctcatcgtgtttcatttgcccttttcttctctcggcttacaatttcatatta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tttattgcctcatcgtgtttcatttgcccttttcttctctcggcttacaatttcatatta 383
Query: 185 ccgtctggggagataacagctctgccttcaaatgttatcgttctctgttccccattcagt 244
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctgtctggggagataacagctctgccttcaaatgttatcgttctctgttccccattcagt 443
Query: 245 ctcacttggagcaacgtgacaatataatcttggcatgtttctacataaaatgagtagaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctcacttggagcaacgtgacaatataatcttggcatgtttctacataaaatgagtagaga 503
Query: 305 gggacacatcagatgtggttaaaggtccctctcatccaaacattgggaatccacccgcta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gggacacatcagatgtggttaaaggtccctctcatccaaacattgggaatccacccgcta 563
Query: 365 atttacaattaacctttcttcaaaaggaacttagaagtgctagagtcgttcttctgtggc 424
||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 564 atttacaattaacctttcttcaagaggaacttagaagtgctagagttgttcttctgtggc 623
Query: 425 tttctaactttct----aacttcctgtggntatatattctg 461
||||||||||||| |||||||| ||| |||||||||||
Sbjct: 624 tttctaactttctgactaacttcctatggttatatattctg 664
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 864
Length adjustment: 10
Effective length of query: 451
Effective length of database: 854
Effective search space: 385154
Effective search space used: 385154
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no417_h04.g1 MSMg01no417_h04.g1 CHROMAT_FILE:
MSMg01no417_h04.g1 PHD_FILE: MSMg01no417_h04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:20 2005
(339 letters)
>mm_chr10_119394336_119395074
Length = 739
Score = 632 bits (327), Expect = 0.0
Identities = 336/339 (99%)
Strand = Plus / Minus
Query: 1 aacaccacatggttcgtgcaaccttggcagagtgactttgtaaaaaggacgggtgcgtgt 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 539 aacaccacatggttcgtgcaactttggcagagtgactttgtaaaaaggacgggtgcgtgt 480
Query: 61 gtgtcatgggctaccactgcaatcataactgccaacgcaacagaatcccttgcacagatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gtgtcatgggctaccactgcaatcataactgccaacgcaacagaatcccttgcacagatt 420
Query: 121 cctgccagctcttctctgtggggttattatgagggcatactgctgacagctatgatgctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 cctgccagctcttctctgtggggttattatgagggcatactgctgacagctatgatgctt 360
Query: 181 atttgctgatatgaaacagcgtcagtgtctttccttagccaagagaaagaaggatccaaa 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 atttgccgatatgaaacagcgtcagtgtctttccttagccaagagaaagaaggatccaaa 300
Query: 241 ggtacgaagccacgcacacgaaggacttagttacatctctcggagcttgcagttaatgtt 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ggtgcgaagccacgcacacgaaggacttagttacatctctcggagcttgcagttaatgtt 240
Query: 301 tgcatatatggggcatggcgtgaggctgtcccccaggga 339
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tgcatatatggggcatggcgtgaggctgtcccccaggga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
