Query= MSMg01no417_o14.b1 MSMg01no417_o14.b1 CHROMAT_FILE:
MSMg01no417_o14.b1 PHD_FILE: MSMg01no417_o14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:57 2005
(574 letters)
>mm_chr10_56352706_56353679
Length = 974
Score = 1071 bits (554), Expect = 0.0
Identities = 569/574 (99%)
Strand = Plus / Plus
Query: 1 tgcctaccaaagtgtattacctgatagggtttagagaccattgccaaaagacataagtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcctaccaaagtgtattacctgatagggtttagagaccattgccaaaagacataagtaa 260
Query: 61 gtctgatagataatcaaggatggctggcagtcctctgtcaggtccagctttgccttgtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtctgatagataatcaaggatggctggcagtcctctgtcaggtccagctttgccttgtgt 320
Query: 121 cctatcttcatctaagtcttccttggtcttgcagatctgtgtgacaggtgcttaagtgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctatcttcatctaagtcttccttggtcttgcagatctgtgtgacaggtgcttaagtgaa 380
Query: 181 tgtatttgcatccctctttcatctaatgcatcttccactgtatatttaggtataaagttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtatttgcatccctctttcatctaatgcatcttccactgtatatttaggtataaagttt 440
Query: 241 aatgtctttctgctccatggtacactgattcagggtctatgtcacaggctcataagaaaa 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatggctttctgctccatggtacactgattcagggtctatgtcacaggctcataagaaaa 500
Query: 301 agcacctcagtctgatctattcaccatggtatctcagcctggggaatgatgctttgtaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcacctcagtctgatctattcaccatggtatctcagcctggggaatgatgctttgtaca 560
Query: 361 ttgtagacacataaaatgctttgttgggtgaaagagtttgttatgagagctttatgactg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgtagacacataaaatgctttgttgggtgaaagagtttgttatgagagctttatgactg 620
Query: 421 acatatgatttatatttctcactcttagaaggtatctcagagatggacgccttttataaa 480
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 621 acatatgatttatatttctcactcttagacggtatctcagagatggacgccttttataaa 680
Query: 481 acaatcaacctatagattttgatttaaatctaaacttatactctaattaatgcttttatt 540
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acgatcaacctatagattttgatttaaatctaaacttatactctaattaatgcttttatt 740
Query: 541 tgtttgcgtgcgtgtgcttgttttgaataagtgt 574
|||||| ||| |||||||||||||||||||||||
Sbjct: 741 tgtttgtgtgtgtgtgcttgttttgaataagtgt 774
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space: 543696
Effective search space used: 543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no417_o14.g1 MSMg01no417_o14.g1 CHROMAT_FILE:
MSMg01no417_o14.g1 PHD_FILE: MSMg01no417_o14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:57 2005
(515 letters)
>mm_chr10_56526387_56527303
Length = 917
Score = 959 bits (496), Expect = 0.0
Identities = 511/516 (99%), Gaps = 2/516 (0%)
Strand = Plus / Minus
Query: 2 agtagatgaaacgcagaccaaatgttgctggattgtttgaatacacatatgaggaaatca 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 agtagatgaaacgcagaccaaatgttgctggattgtttgaatacacatatgaggaaatca 658
Query: 62 gtcagttaacgtcagcttttaaggtacaccttgcccagcttgtttaatgaattcgaaccc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 gtcagttaacgtcagcttttaaggtacaccttgcccagcttgtttaatgaattcgaaccc 598
Query: 122 ctgggggtgtctcctggacctttgtacagac-aaaaaaaaaagatttcagcaaaatcagg 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 597 ctgggggtgtctcctggacctttgtacagacaaaaaaaaaaagatttcagcaaaatcagg 538
Query: 181 gtcaccataaccccttttaaaaggcgctatgtgcttctcccttatctgaaaaatcttagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 gtcaccataaccccttttaaaaggcgctatgtgcttctcccttatctgaaaaatcttagc 478
Query: 241 tatgctttcaagattactctctgggaggctttattaagaaaaaaaaaaagcctcctttct 300
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 477 tatgctttcaagattactctctgggaggctttattaaaaaaaaaaaaaagcctcctttct 418
Query: 301 tctgcctgcttcatgagtctgtgtatggagtaaacatttggaaatgttctggagttcttt 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 417 tctgcctgcttcatgagtctgtgtatggagtaaacatttggaaatgttctggggttcttt 358
Query: 361 agaaagaagtgagcctgacctcagacactattcagccacgtgtggttatcatttctgaac 420
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 agaaagaagtgcgcctgacctcagacactattcagccacgtgtggttatcatttctgaac 298
Query: 421 aatcactaaatgacttttagaaattgggaaattggcaggg-aaaaaaatacatccatttt 479
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 297 aatcactaaatgacttttagaaattgggaaattggcagggaaaaaaaatacatccatttt 238
Query: 480 taaatatccacttttaggaaaaacattctctctgtt 515
||||||||||||||||||||||||||||||||||||
Sbjct: 237 taaatatccacttttaggaaaaacattctctctgtt 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 917
Length adjustment: 10
Effective length of query: 505
Effective length of database: 907
Effective search space: 458035
Effective search space used: 458035
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
