Query= MSMg01no419_l18.b1 MSMg01no419_l18.b1 CHROMAT_FILE:
MSMg01no419_l18.b1 PHD_FILE: MSMg01no419_l18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:22 2005
(374 letters)
>mm_chr10_26720121_26720894
Length = 774
Score = 708 bits (366), Expect = 0.0
Identities = 372/374 (99%)
Strand = Plus / Minus
Query: 1 tagccccatggactttgcgcagcctatagccttcaaaaatgccgacattggccgctgtac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tagccccatggactttgcgcagcctatagccttcaaaaatgccgacattggccgctgtac 515
Query: 61 ttatcaaaagccccgggaagatgagagtgaagcagttccagctgaagttattgtccagcc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ctatcaaaagccccgggaagatgagagtgaagcagttccagctgaagttattgtccagcc 455
Query: 121 tcagccggtgcccacccctgccttccctttcccagcccccaccatggtgcatgtaagtgt 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 454 tcagccggtgcccacccctgccttccctttcccggcccccaccatggtgcatgtaagtgt 395
Query: 181 acacatagactctgcttcggaaccttctagtatgagccatttgcagaaggaaagttgttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 acacatagactctgcttcggaaccttctagtatgagccatttgcagaaggaaagttgttc 335
Query: 241 aagatatctagtagattctgccactatcattggaggaccagaaacctatctataaaaacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aagatatctagtagattctgccactatcattggaggaccagaaacctatctataaaaacc 275
Query: 301 tgacctcctcgtgtcttctttggattgcttttgttttcatgtctatccttttaattttga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tgacctcctcgtgtcttctttggattgcttttgttttcatgtctatccttttaattttga 215
Query: 361 tgttcataaactag 374
||||||||||||||
Sbjct: 214 tgttcataaactag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 774
Length adjustment: 9
Effective length of query: 365
Effective length of database: 765
Effective search space: 279225
Effective search space used: 279225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no419_l18.g1 MSMg01no419_l18.g1 CHROMAT_FILE:
MSMg01no419_l18.g1 PHD_FILE: MSMg01no419_l18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:22 2005
(443 letters)
>mm_chr10_26589659_26590502
Length = 844
Score = 812 bits (420), Expect = 0.0
Identities = 438/444 (98%), Gaps = 1/444 (0%)
Strand = Plus / Plus
Query: 1 aaacaacagaaagctgtgaaaatcaaaaccagaggtaaagttagagttgcttcccaggta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaacaacagaaagctgtgaaaatcaaaaccagaggtaaagttagagttgcttcccaggta 260
Query: 61 gcaaaaatggatttgagtcttgggtgctattctttgtggtccaatggaacacaaaccaaa 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaaaaatggatttgagtcttgtgtgctattctttgtggtccaatggaacacaaaccaaa 320
Query: 121 taaatttgagacttgagtatatctggagttcaaattctcaactac-ttttttacaaacta 179
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 321 taaatttgagacttgagtatatctggagttcaaattctcaactactttttttacaaacca 380
Query: 180 ataaccagaaaacgtagaaccgaaatatttaattcccaggaaagtgaattgaaattcaag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataaccagaaaacgtagaaccgaaatatttaattcccaggaaagtgaattgaaattcaag 440
Query: 240 aaattatcatgctcatggtttcctctttagaaaactgtatgtttgaagagaagtctttgg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaattatcatgctcatggtttcctctttagaaaactgtatgtttgaagagaagtctttgg 500
Query: 300 taaacctgtcagttttcaaaaccagatcttagaaaatggcgttcaagggtttgctgttca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 501 taaacctgtcagttttcaaaaccagatcttagaaaatggcgttcaagggtttgctcttca 560
Query: 360 atggttacttttgttattccacgataaaatatgagatagttaacaatctgcccctttgtt 419
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atggttgcttttgttattccatgataaaatatgagatagttaacaatctgcccctttgtt 620
Query: 420 cactcacattgtattttttaataa 443
||||||||||||||||||||||||
Sbjct: 621 cactcacattgtattttttaataa 644
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 844
Length adjustment: 10
Effective length of query: 433
Effective length of database: 834
Effective search space: 361122
Effective search space used: 361122
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
