Query= MSMg01no421_o18.b1 MSMg01no421_o18.b1 CHROMAT_FILE:
MSMg01no421_o18.b1 PHD_FILE: MSMg01no421_o18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:15 2005
(388 letters)
>mm_chr10_65674291_65675078
Length = 788
Score = 727 bits (376), Expect = 0.0
Identities = 385/388 (99%)
Strand = Plus / Minus
Query: 1 atcagtaaaataaattgattcaccaacttggatgttggtgacattcataattatgtgtgt 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 atcagtaaaattaattgattcaccaacttggatgttggtgacattcataattatgtgtgt 529
Query: 61 tctggactcccaatctgaggtgaataggcatgtattgtcttgcctgggaaaactcttgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 tctggactcccaatctgaggtgaataggcatgtattgtcttgcctgggaaaactcttgtg 469
Query: 121 acataaaacttttgatgtcatgactatggtacatgtgattttgtgtgttatatgctacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 acataaaacttttgatgtcatgactatggtacatgtgattttgtgtgttatatgctacac 409
Query: 181 aatctgttgaatatcttgcaaatcactcttggaaatgttttgtacatatattacaaggat 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 aatctgttgaataccttgcaaatcactcttggaaatgttttgtacatatattacaaggat 349
Query: 241 ggaggcagtcaccctaagcagaggcatactcaataaatttttagtcagttgaaacacaaa 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 348 ggaggcagtcaccctaagcagaggcatacgcaataaatttttagtcagttgaaacacaaa 289
Query: 301 gtcattgatatcacccagtaaccattgggtattttaaatttctttgaaaggtgttttttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 gtcattgatatcacccagtaaccattgggtattttaaatttctttgaaaggtgttttttc 229
Query: 361 tttttcccattttaattaattttgcttt 388
||||||||||||||||||||||||||||
Sbjct: 228 tttttcccattttaattaattttgcttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 788
Length adjustment: 9
Effective length of query: 379
Effective length of database: 779
Effective search space: 295241
Effective search space used: 295241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no421_o18.g1 MSMg01no421_o18.g1 CHROMAT_FILE:
MSMg01no421_o18.g1 PHD_FILE: MSMg01no421_o18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:15 2005
(315 letters)
>mm_chr10_65617251_65617965
Length = 715
Score = 543 bits (281), Expect = e-159
Identities = 307/317 (96%), Gaps = 4/317 (1%)
Strand = Plus / Plus
Query: 1 aatgtagattaaaatttttaagtggaaaaaatgaaatactttttatagcatccaaataga 60
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 aatgtagattaaaatttttaaatggaaaaaatgaaatacattttatagcatccaaataga 260
Query: 61 aatgatagcattggattttaatatgatacaagattgtttcatttcttctatagatttatt 120
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatgataacatttgattttaatatgatacaagattgtttcatttcttctatagatttatt 320
Query: 121 taaggtcaaataacttttaacttgtcaatttcatataaatatttaaataagaagtatata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaggtcaaataacttttaacttgtcaatttcatataaatatttaaataagaagtatata 380
Query: 181 tacatatgctctctatctttttaaacttactcttctatacattatattctgattgtagtt 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 381 tacatatgctctctatctttttaaacttactcttctatatattatattctgattgtattt 440
Query: 241 tcctc--ttcttccacttctcccagtcacccttctatcccagatccaattttatgacttc 298
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcctccgtt--tccacttctcccagtcacccttctatcccagatccaattttatgacttc 498
Query: 299 cagaatgttctctgtgg 315
|||||||||||||||||
Sbjct: 499 cagaatgttctctgtgg 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
