Query= MSMg01no422_j08.b1 MSMg01no422_j08.b1 CHROMAT_FILE:
MSMg01no422_j08.b1 PHD_FILE: MSMg01no422_j08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:03 2005
(524 letters)
>mm_chr10_119285443_119286366
Length = 924
Score = 953 bits (493), Expect = 0.0
Identities = 513/521 (98%), Gaps = 4/521 (0%)
Strand = Plus / Plus
Query: 6 gaattctgtatttct--tccgaaacgggctacctcctagtagatggtgcaccctgaggag 63
||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctgtatttctcat--gaaacaggctacctcctagtagatggtgcaccctgaggag 263
Query: 64 tttatagattgaatacatctttaagaacactatcaaagagaatcaagcagaccaacttca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttatagattgaatacatctttaagaacactatcaaagagaatcaagcagaccaacttca 323
Query: 124 cacaggaaattgcaaggggaaatttccaaagaccccacagtttgatttacacttagagga 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aacaggaaattgcaaggggaaatttccaaagaccccacagtttgatttacacttagagga 383
Query: 184 tgtattcattttttcatcattattaaatatgatcctcttcctttataaaccagaagagtg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgtattcattttttcatcattattaaatatgatcctcttcctttataaaccagaagagtg 443
Query: 244 cacattctctgtgctcagccccctgtcagcctaactagtgaaaaaccatttgcatttgcc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cacattctctgtgctcagccccctgtcagcctaactagtgaaaaaccatttgcatttgcc 503
Query: 304 gtgaatataatacaataaaaaaataatcacaaaattcacttacatttatacatggtgttc 363
|||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtgagtataatacaataataaaataatcacaaaattcacttacatttatacatggtgttc 563
Query: 364 agttttcagaaccactgatggtctttccatgttgatttcctagattgttttatgaatctt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agttttcagaaccactgatggtctttccatgttgatttcctagattgttttatgaatctt 623
Query: 424 taattatcaagtttcctttctgctttttaaaaacgctgctcggtagctgctgaagcgtat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 taattatcaagtttcctttctgctttttaaaaacgctgctcggtagctgctgaagcgtat 683
Query: 484 ttaaacctgtgaactgtagatacacattgtatggtctggtg 524
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttaaacctgtgaactgtagatacacattgtatggtctggtg 724
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 924
Length adjustment: 10
Effective length of query: 514
Effective length of database: 914
Effective search space: 469796
Effective search space used: 469796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no422_j08.g1 MSMg01no422_j08.g1 CHROMAT_FILE:
MSMg01no422_j08.g1 PHD_FILE: MSMg01no422_j08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:03 2005
(486 letters)
>mm_chr10_119451389_119452274
Length = 886
Score = 878 bits (454), Expect = 0.0
Identities = 478/486 (98%)
Strand = Plus / Minus
Query: 1 agtcacactcccttattctacagcgttatctagctcctccggcttttgaagatataagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 agtcacactcccttattctacagcgttatctagctcctccggcttttgaagatataagct 627
Query: 61 caaagtttctgagagttcttttggagagacacctgatttcactgagtacaggaagttacc 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 caaagcttctgagagttcttttggagagacacctgatttcactgagtacaggaagttacc 567
Query: 121 tcacagactaattcactcattcttagcttccaactaatcttactgtctgagctatatcat 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 566 tcacagactaattcactcattcttagcttccaactaatcctactgtctgagctatatcat 507
Query: 181 catttttataaaccccaagttctggatgcctccaattcttgagccctttggaaatataag 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 catttttatacaccccaagttctggatgcctccaattcttgagccctttggaaatataag 447
Query: 241 gtgcactgatgttccctgtcagggtctgtggctgtggttttccttttcttgatcttcatc 300
||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 446 gtgcactgaggttccttgtcagggtctgtggctgttgttttccttttcttgatcttcatc 387
Query: 301 taggatttggccattgaaaaaccttgtattttctcatatcaagagagcatgcactgtgcc 360
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 386 taggatttggccattgaaaaacctcgtattttctcatatcaagagagcatgcactgtgcc 327
Query: 361 tccatggttcaatcttagaagtgttaaacccatcgtcgttcaccctcactgggtaaagct 420
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 326 tccatggttcaatcttagaagtgttaaacccatcatcgttcaccctcactgggtaaagct 267
Query: 421 tatttgcagaggaaagatgaaaatgtgttgtgcctgtcacacagcccccctttgtgattt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tatttgcagaggaaagatgaaaatgtgttgtgcctgtcacacagcccccctttgtgattt 207
Query: 481 tatgaa 486
||||||
Sbjct: 206 tatgaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space: 416976
Effective search space used: 416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
