Query= MSMg01no424_b05.b1 MSMg01no424_b05.b1 CHROMAT_FILE:
MSMg01no424_b05.b1 PHD_FILE: MSMg01no424_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:55 2005
(182 letters)
>mm_chr10_44188869_44189453
Length = 585
Score = 290 bits (150), Expect = 3e-83
Identities = 165/170 (97%), Gaps = 5/170 (2%)
Strand = Plus / Minus
Query: 15 gaattctgagta-tttaaaaatacattaaggctggggtgtagctctagnggtagaatagg 73
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 383 gaattctgagtagtttaaaaatacattaaggctggggtgtagctctag-ggtagaatagg 325
Query: 74 aactttagccaggtcctgggctaattcttcagcactgaaaac-attcatatatgctgatc 132
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 324 aactttagccaggtcctgggctaattcttcagcactgaaaacaattcatatatgctgatc 265
Query: 133 -ttaactaaattttt-aaatgatgcatagttgcactttggagtactctgt 180
|||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 264 attaactaaatttttaaaatgatgcatagttgcactttggagtactctgt 215
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 182
Length of database: 585
Length adjustment: 8
Effective length of query: 174
Effective length of database: 577
Effective search space: 100398
Effective search space used: 100398
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no424_b05.g1 MSMg01no424_b05.g1 CHROMAT_FILE:
MSMg01no424_b05.g1 PHD_FILE: MSMg01no424_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:55 2005
(518 letters)
>mm_chr10_44042640_44043557
Length = 918
Score = 986 bits (510), Expect = 0.0
Identities = 516/518 (99%)
Strand = Plus / Plus
Query: 1 catgactgatgttgttcctcatacactggacttctgcagagatggcaagcgctgctttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgactgatgttgttcctcatacactggacttctgcagagatggcaagcgctgctttcc 260
Query: 61 atgttatgtgttcatcgtggactcagaatgagtaccatcaagtgacagaattttagtggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgttatgtgttcatcgtggactcagaatgagtaccatcaagtgacagaattttagtggt 320
Query: 121 aaaagtcagattcctccagaattctctagcggtgttacacaccgtttctctgtcatttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaagtcagattcctccagaattctctagcggtgttacacaccgtttctctgtcatttac 380
Query: 181 atagtagtcagtgtgtgagtttcaggtctgtgttcctgaagtccaggtgcttcagtatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atagtagtcagtgtgtgagtttcaggtctgtgttcctgaagtccaggtgcttcagtatga 440
Query: 241 gccagtgttctagaaatgaggctaatggcaggaggtggtcccaacatgcagccacatgtt 300
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 gccagtgttctagaaatgaggctaatggcaggaggtggttccaacatgcagccacatgtt 500
Query: 301 atttagaattccatccataaggaaggagatggtgttaatgaggttacctccacgaggctc 360
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atttagaattccatccatcaggaaggagatggtgttaatgaggttacctccacgaggctc 560
Query: 361 tgtgaaatggccacgaaaggtctgggcagggatggtaggccttgcataggcaaagggact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtgaaatggccacgaaaggtctgggcagggatggtaggccttgcataggcaaagggact 620
Query: 421 tgagaagaacctgtagccagctgaaggagacactgatttataggggatgcacatcaagag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgagaagaacctgtagccagctgaaggagacactgatttataggggatgcacatcaagag 680
Query: 481 gaataaggccacaaaggaaaaggttcctgcattgagga 518
||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaataaggccacaaaggaaaaggttcctgcattgagga 718
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space: 461264
Effective search space used: 461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
