Query= MSMg01no425_d05.b1 MSMg01no425_d05.b1 CHROMAT_FILE:
MSMg01no425_d05.b1 PHD_FILE: MSMg01no425_d05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:21 2005
(495 letters)
>mm_chr10_29496262_29497156
Length = 895
Score = 934 bits (483), Expect = 0.0
Identities = 492/495 (99%)
Strand = Plus / Plus
Query: 1 actttgatttacactcttcctggtatctattgaagtttttatcaataatacctttatctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actttgatttacactcttcctggtatctattgaagtttttatcaataatacctttatctt 260
Query: 61 atattctgtttctcagaatcaatggatcgttttttctttggggtaaaaaaacatactcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atattctgtttctcagaatcaatggatcgttttttctttggggtaaaaaaacatactcat 320
Query: 121 gacatcaataatctgtgttggtacagattctgataattagattaaacaaagaatcaagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacatcaataatctgtgttggtacagattctgataattagattaaacaaagaatcaagac 380
Query: 181 tattgaacattttttcttttaactattgctaacaggaatgtcactctttgtcatcaggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tattgaacattttttcttttaactattgctaacaggaatgtcactctttgtcatcaggtt 440
Query: 241 ttctctgttaaggattgcctagaagttggtaggaaaaaattgaaatgcaattgatgtgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttctctgttaaggattgcctagaagttggtaggaaaaaattgaaatgcaattgatgtgaa 500
Query: 301 cacagcacaggaaagcagaaggtttatcatctcatctacctctccttttaaagtttatct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacagcacaggaaagcagaaggtttatcatctcatctacctctccttttaaagtttatct 560
Query: 361 cattgagaagcacctaccgacccttatatgcaaaaataacaacaaaagcattgtctaaaa 420
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cattgagaagcacctactggcccttatatgcaaaaataacaacaaaagcattgtctaaaa 620
Query: 421 acacatattggaacaaatccttcccttatagttctaacaaaactaacatgcacttctaat 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 621 acacatattggaacaaatccttcccttatagttctaacaaaactaacatgcacttccaat 680
Query: 481 aagaattaattactg 495
|||||||||||||||
Sbjct: 681 aagaattaattactg 695
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space: 429225
Effective search space used: 429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no425_d05.g1 MSMg01no425_d05.g1 CHROMAT_FILE:
MSMg01no425_d05.g1 PHD_FILE: MSMg01no425_d05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:21 2005
(483 letters)
>mm_chr10_29671131_29672018
Length = 888
Score = 812 bits (420), Expect = 0.0
Identities = 433/442 (97%), Gaps = 9/442 (2%)
Strand = Plus / Minus
Query: 51 ataaatgcatctaaagagattcttttggctgggcagtggtggcacacgcctttaatccca 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 ataaatgcatctaaagagattcttttggctgggcagtggtggcacacgcctttaatccca 829
Query: 111 gcacttgggaggcagaggcaggcagatttttgggtttgaggtcagcctggtctacaaagt 170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 gcacttgggaggcagaggcaggcagatttttgggtttgaggtcagcctggtctacaaagt 769
Query: 171 gagttacaggacagccagggctatacagagaaaccctgtttcaaaaaaccaaccaaccaa 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 gagttacaggacagccagggctatacagagaaaccctgtttcaaaaaaccaaccaaccaa 709
Query: 231 ccaa----tcaatcaatcaataaaaataagagattcttttgatcagccaggaggtgtcag 286
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 ccaaccaatcaatcaatcaataaaaataagagattcttttgatcagccaggaggtgtcag 649
Query: 287 tttcttatagttagtgttgcttccttgggttatggtaaacacatgttcatatttactaac 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 tttcttatagttagtgttgcttccttgggttatggtaaacacatgttcatatttactaac 589
Query: 347 cttaaattctaaacacaactaaattaccaataatatgata-----agtaagtactcattc 401
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 588 cttaaattctaaacacaactaaattaccaataatatgatattataagtaagtactcattc 529
Query: 402 gtgcctatcacatttgttgttttggaaatatatttgtaaataaactatacttgttaacag 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 gtgcctatcacatttgttgttttggaaatatatttgtaaataaactatacttgttaacag 469
Query: 462 tacaaacttttttatttaaatg 483
||||||||||||||||||||||
Sbjct: 468 tacaaacttttttatttaaatg 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 888
Length adjustment: 10
Effective length of query: 473
Effective length of database: 878
Effective search space: 415294
Effective search space used: 415294
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|