Query= MSMg01no425_h05.b1 MSMg01no425_h05.b1 CHROMAT_FILE:
MSMg01no425_h05.b1 PHD_FILE: MSMg01no425_h05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:40 2005
(530 letters)
>mm_chr10_66318844_66319771
Length = 928
Score = 555 bits (287), Expect = e-162
Identities = 342/369 (92%), Gaps = 18/369 (4%)
Strand = Plus / Minus
Query: 173 gcagttaagagcgctggctgcttttctagaggaccatggttgattctcagcacccatgtg 232
|||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 928 gcagttaaga-cgctggctgcttttctagaggaccatggttaattctcagcacccatgtg 870
Query: 233 gcagctcacagccatctgcaagtccagtctcagggatttctgcgtcttcttttgtcatct 292
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 869 gcagctcacagccatctgcaagtccagtctcagggatttctgcgccttcttttgtcctct 810
Query: 293 g---------catacaggaaggcaaaatacccatgagtataaagtaaaaacagataaata 343
| ||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 809 gtgggcactgcatacaggaaggcaaaatacccatgtgtataaaataaaaacagataaata 750
Query: 344 tttttaaaaattaaccaccctgtgaaatatcacctttttgcttgtcttctaacatctaat 403
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 749 tttttaaaaattaaccaccccatgaaatatca--tttttgcttgtcttctaacatctaat 692
Query: 404 aattctataggaagtctgatactggtgaaattaaaaaaaaaaa---ggtgtccctttcat 460
||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 691 aatgctataggaagtctgatactggtgaaattaaaaaaaaaaaaaaggtatccctttcat 632
Query: 461 agaagcctgcataattcctttgaattttttttttttattcctttgaatttttaaaaaaaa 520
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 631 agaagcctgcataattcctttgaattttttttt---attcctttgaatttttaaaaaaaa 575
Query: 521 tttctggag 529
|||||||||
Sbjct: 574 tttctggag 566
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 928
Length adjustment: 10
Effective length of query: 520
Effective length of database: 918
Effective search space: 477360
Effective search space used: 477360
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no425_h05.g1 MSMg01no425_h05.g1 CHROMAT_FILE:
MSMg01no425_h05.g1 PHD_FILE: MSMg01no425_h05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:40 2005
(342 letters)
>mm_chr10_66122268_66123009
Length = 742
Score = 654 bits (338), Expect = 0.0
Identities = 341/342 (99%)
Strand = Plus / Plus
Query: 1 tcctgagaagcgcactcaacacacagtttgccttattacacatgtaccaaagcccatata 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctgagaagcgcactcaacacacaatttgccttattacacatgtaccaaagcccatata 260
Query: 61 ggcaagactgaccattgtctataattcgcagatatgttcctgaatgtctttgcatgaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcaagactgaccattgtctataattcgcagatatgttcctgaatgtctttgcatgaaga 320
Query: 121 tgagatggtgtcaatgctaaaatatcccattgtttaagccgtggtacaggttggtggtcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgagatggtgtcaatgctaaaatatcccattgtttaagccgtggtacaggttggtggtcc 380
Query: 181 aaagttgccaagagtttgctaggtgcattgttcaaagagggaagtatacacaataccttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaagttgccaagagtttgctaggtgcattgttcaaagagggaagtatacacaataccttc 440
Query: 241 aggtaagggtctcatgatgccaagtggattactagaagaaaagtatgtggagaccatgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggtaagggtctcatgatgccaagtggattactagaagaaaagtatgtggagaccatgcc 500
Query: 301 cagtgaagtcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 342
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagtgaagtcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
