Query= MSMg01no429_a15.b1 MSMg01no429_a15.b1 CHROMAT_FILE:
MSMg01no429_a15.b1 PHD_FILE: MSMg01no429_a15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:23 2005
(639 letters)
>mm_chr10_109916364_109917402
Length = 1039
Score = 804 bits (416), Expect = 0.0
Identities = 425/428 (99%)
Strand = Plus / Minus
Query: 212 cttcctgaatttttaaagtttctcttgataaatgtttattatcctcttgataaatggggt 271
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1039 cttcctggatttttaaagtttctcttgataaatgtttattatcctcttgataaatggggt 980
Query: 272 tacctttacatgtgactcggggcttcccttacagcttcccaagggctttcctttttctat 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979 tacctttacatgtgactcggggcttcccttacagcttcccaagggctttcctttttctat 920
Query: 332 atacttaatagtgttttaaagaagaatggagcttattttctggtcttgtctctggcactc 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 atacttaatagtgttttaaagaagaatggagcttattttctggtcttgtctctggcactc 860
Query: 392 ggaatgctcccttatatctgagatacttttgctagggttttattggatgggtcctctttg 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 ggaatgctcccttatatctgagatacttttgctagggttttattggatgggtcctctttg 800
Query: 452 cttctaatctgaaattctccttctatgaccgagagactcacagatttggtttttaaaggg 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 cttctaatctgaaattctccttctatgaccgagagactcacagatttggtttttaaaggg 740
Query: 512 cacgtgtagatcttaggttctacttttatattcttattatccttctcattgtctgaacat 571
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 cacttgtagatcttaggttctacttttatattcttattatccttctcattgtctgaacat 680
Query: 572 tctaatgcacgttaattctagtgaggccctggtagcccatcttcatttgttccattctat 631
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 679 tctaatgcacgttaattctagtgaagccctggtagcccatcttcatttgttccattctat 620
Query: 632 ggatgaag 639
||||||||
Sbjct: 619 ggatgaag 612
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_a15.g1 MSMg01no429_a15.g1 CHROMAT_FILE:
MSMg01no429_a15.g1 PHD_FILE: MSMg01no429_a15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:24 2005
(639 letters)
>mm_chr10_109729497_109730538
Length = 1042
Score = 1035 bits (535), Expect = 0.0
Identities = 615/645 (95%), Gaps = 9/645 (1%)
Strand = Plus / Plus
Query: 1 ataccaaatggtcctgcctgggaacatttgatttcaagtgacattaatcaatacaaatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 ataccaaatggtcctgcctgggaacatttgatttcaagtgacattaatcaatacatatta 260
Query: 61 aagcttcaatttctctctttgagaaataaaaattgcgtaaaatgaatgccagttctaaac 120
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 261 aagcttcaatttctctctttgagaagtaaaaattgcgtaaaatgaatgccagttctaagc 320
Query: 121 aaataatagaatgggctaacacatgtgtatgtacagatatatattgattttcttagagat 180
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaataatagaatgagctgacacatgtgtatgtacagatatatattgattttcttagagat 380
Query: 181 attttcaacctcacttgggtttatgttttatccaaaaaaatgaatatcagaatacctagc 240
|||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||| |
Sbjct: 381 attttcaacctcacatgggtttgtgttttatccaaaaaaatgaatgtcagaatacctaac 440
Query: 241 agatttaaaacaaagttttacataatttttccacaaataaaacattctttttagatagca 300
||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 441 agacaaaaaataaagttttacataatttttccacaaataaaaccttctttttagatagca 500
Query: 301 tcaactagaaaaaaaagagtgaattcagactcacatattttccctccatcttttgatata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcaactagaaaaaaaagagtgaattcagactcacatattttccctccatcttttgatata 560
Query: 361 atcaggttatttttttcaaataaaatattcagtatttcaaattgaaaaaaa---gaaaat 417
|||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 561 atcaggtt--ttttttcaaataaaatattcagtatttcaaattgaaaaaaaaaagaaaat 618
Query: 418 tagtcattagcaaactgcctagaagaaacagctttggaggtgatgtttataacaaagagg 477
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 619 tagtcactagcaaactgcctagaagaaatagctttggaggtgatgtttataacaaagagg 678
Query: 478 ttttccccgagctatgctgaaagagaaagggtaaattaaaatgtgttct---gtcttgac 534
|||||| |||||||||| ||| |||||||||||||||||||||||||| ||||||||
Sbjct: 679 ctttccc-gagctatgctaaaacagaaagggtaaattaaaatgtgttcttctgtcttgac 737
Query: 535 tttctacacagccccaagaaggcctcctggcaatgctgtcacagccaatccagtcttaga 594
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ttactacacagccccaagaaggcctcctggcaatgctgtcacagccaatccagtcttaga 797
Query: 595 ttcctgagtgcagtctaccaatctctcatttgcttagcggctgat 639
|||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 798 ttcctgagtgcagtctaccaatctctcatttgcttagctgctgat 842
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1042
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1032
Effective search space: 649128
Effective search space used: 649128
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
