XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACT
CTTAAGCCCAGACTGCTTTCAAACTTGCAGCAATTCTTTTGCCTCAGCTT
TTGAAGAGCTGAGACTAGAGCCATGAGCTACTACTATACTGACAACTCAG
ATTTATTTTTAAATATTTACAATTGTAATCTTTGCTTCAGAAGTTATTAT
TAATATTTAATCTGGATTTTTCAAACTGTACCTATATCATCACAAATGAA
GGACATTCTTTGTAGCCAGGCTAGGTGGTGGACACCTATAATTCTAGCAC
TCGAAGACTGAGACAGGAAGACTGCCATAAATTCAAAGCCAATTGAAATA
TAGAAGATCCTGTTCCCCAAAACAAAAAACAATAACACAGAAGAAACAAA
AGACAATAGCAATAACAACAAATATAGTTGACCCATTACCTAAAGACTCA
TCAGGGAACATTAGCAAATCCATTAAGACTACAAACTACCATAAAGCTTT
TCAATAATTAATTACAGAAGGAATAATGAAATGATGATTTTGCCATTAAT
GTAAGTCATTTTGCTTACTGAATAAGATGATAGTGTGAAAATGGCAGTAT
CAAAACTGTTTTTCTGGAAATGAGAAGCATTAGGATATCGAAAGGAGACC
TCAGAAAACCATGCCTCCCCCCAACCATAGCCTTCAGTAAATGAGAATAC
TACCGAGACCCCCAACTGGACCCGTGGAGAGCATGAGAAACTTTGG

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGCA
CCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAA
CAACCCTGACATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAAT
TCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCT
CCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCT
GGCGGTTCCTTTTAAAATTGGACATAGTACTACCGGAGGATCCAGCAATA
CCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACAC
ATGCTCCACTATGTTCATAGCAGCCTTATGTATAATAGCCAGAAGCTGGA
AAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTAC
ATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAA
ATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAA
CACATTCTCAAAGGAACTCACACAATATGTACTCTCTGATAAGTGGATAT
TAACCCCAACCCTAGGATACCCAGATATAAGAACAAATTTGCTAACACAT
GAAACTCCAGAAGAATGAAGACTGAAGTGGGGACCCTATGCC

Query= MSMg01no429_o11.b1 MSMg01no429_o11.b1 CHROMAT_FILE:
MSMg01no429_o11.b1 PHD_FILE: MSMg01no429_o11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:31 2005
         (540 letters)



>mm_chr10_55809606_55810545
          Length = 940

 Score =  975 bits (504), Expect = 0.0
 Identities = 529/538 (98%), Gaps = 3/538 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcactcttaagcccagactgctttcaaacttgcagcaattcttttgcctcagctt 63
           |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 204 ggaattcactctgaagcccagactgctttcaaacttgcagcaatccttttgcctcagctt 263

                                                                       
Query: 64  ttgaagagctgagactagagccatgagctactactatactgacaactcagatttattttt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttgaagagctgagactagagccatgagctactactatactgacaactcagatttattttt 323

                                                                       
Query: 124 aaatatttacaattgtaatctttgcttcagaagttattattaatatttaatctggatttt 183
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 324 aaatatttacaattgtaatctttgcttcagaagttattattaatatttaatcaggatttt 383

                                                                       
Query: 184 tcaaactgtacctatatcatcacaaatgaaggacattctttgtagccaggctaggtggtg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcaaactgtacctatatcatcacaaatgaaggacattctttgtagccaggctaggtggtg 443

                                                                       
Query: 244 gacacctataattctagcactcgaagactgagacaggaagactgccataaattcaaagcc 303
           | ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggcacctataattctagcac--gaagactgagacaggaagactgccataaattcaaagcc 501

                                                                       
Query: 304 aattgaaatatagaagatcctgttccccaaaacaaaaaa-caataacacagaagaaacaa 362
           ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 502 aattgaaatatagaagatcctgttccccaaaacaaaaaaacaataacgcagaagaaacaa 561

                                                                       
Query: 363 aagacaatagcaataacaacaaatatagttgacccattacctaaagactcatcagggaac 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 aagacaatagcaataacaacaaatatagttgacccattacctaaagactcatcagggaac 621

                                                                       
Query: 423 attagcaaatccattaagactacaaactaccataaagcttttcaataattaattacagaa 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 attagcaaatccattaagactacaaactaccataaagcttttcaataattaattacagaa 681

                                                                     
Query: 483 ggaataatgaaatgatgattttgccattaatgtaagtcattttgcttactgaataaga 540
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ggaataatgaaattatgattttgccattaatgtaagtcattttgcttactgaataaga 739


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 940
Length adjustment: 10
Effective length of query: 530
Effective length of database: 930
Effective search space:   492900
Effective search space used:   492900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)