Query= MSMg01no431_l09.b1 MSMg01no431_l09.b1 CHROMAT_FILE:
MSMg01no431_l09.b1 PHD_FILE: MSMg01no431_l09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:08 2005
(487 letters)
>mm_chr10_73497577_73498462
Length = 886
Score = 886 bits (458), Expect = 0.0
Identities = 479/486 (98%), Gaps = 3/486 (0%)
Strand = Plus / Minus
Query: 3 ggaattcattacca-ttttcatttgtttcttttgacaaggatgttgcttgctattagcat 61
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 867 ggaattcattaccatttttc-tttgtttcttttgacaaggatgttgcttgctattagcat 809
Query: 62 gttatagtcacacattgtctggttgtttatttgttgttgttgttttttatagcatttcac 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 gttatagtcacacattgtctggttgtttatttgttgttgttgttttttatagcatttcac 749
Query: 122 tctttagcccaggttagactttaattctttatcctcttgccttagcctcataggtgttag 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 tctttagcccaggttagactttaattctttatcctcttgccttagcctcataggtgttag 689
Query: 182 aagcatgctctatatatcatgctcccttcaggcatttcatgatgtgacatttttgaaaac 241
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 aagcatactctatatatcatgctcccttcaggcatttcatgatgtgacatttttgaaaac 629
Query: 242 tctccaggacataaagatatttctatagagaggtttctttcatgcttctcgaggtttctg 301
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 628 tctccaggacataaagatatttctatagagaggtttctaccatgcttctcgaggtttctg 569
Query: 302 tctagcttggggacaaaccaatattactgtccaaaaaaatcattcttatttagttggctt 361
|||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 568 tctagcttggggacaaaccaatattactgtcc-aaaatatcattcttatttagttggctt 510
Query: 362 tgtaatcttgggcatgaaatctagaccttcatgaggttctatatcactgagctacatcaa 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tgtaatcttgggcatgaaatctagaccttcatgaggttctatatcactgagctacatcaa 450
Query: 422 gttaattttttttaatgtgacaaaattagtaactatcgaatttctctgaatgctaaagag 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gttaattttttttaatgtgacaaaattagtaactatcgaatttctctgaatgctaaagag 390
Query: 482 aagaga 487
||||||
Sbjct: 389 aagaga 384
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 886
Length adjustment: 10
Effective length of query: 477
Effective length of database: 876
Effective search space: 417852
Effective search space used: 417852
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no431_l09.g1 MSMg01no431_l09.g1 CHROMAT_FILE:
MSMg01no431_l09.g1 PHD_FILE: MSMg01no431_l09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:08 2005
(422 letters)
>mm_chr10_73363948_73364769
Length = 822
Score = 808 bits (418), Expect = 0.0
Identities = 421/422 (99%)
Strand = Plus / Plus
Query: 1 tgataagatttatagtgaaaggaaaaggttcatctaggatcctttcctcttaaattgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgataagatttatagtgaaaggaaaaggttcatctaggatcctttcctcttaaattgatc 260
Query: 61 tcaccatttgtggtatccagaacacagagcctcaaagaggttaacgttttccttccaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaccatttgtggtatccagaacacagagcctcaaagaggttaacgttttccttccaaga 320
Query: 121 aaccctcactgtaccaaggcccatggaaagtgaaagtgggggctggagatgaggttaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaccctcactgtaccaaggcccatggaaagtgaaagtgggggctggagatgaggttaagt 380
Query: 181 gcattaattttgaattttcggtggggagatgggcccaatgtagccataaaagagagtatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcattaattttgaattttcggtggggagatgggcccaatgtagccataaaagagagtatc 440
Query: 241 aggggaggtcagagtcacacagatggagaagctcagttatcagtaatagtttctcagata 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggggaggccagagtcacacagatggagaagctcagttatcagtaatagtttctcagata 500
Query: 301 gaactaaatcacgagccaaataagcgattcagtttctaagaccagaaaaggtatagagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaactaaatcacgagccaaataagcgattcagtttctaagaccagaaaaggtatagagat 560
Query: 361 ggaatcattcctatgcctgctgagatgacatggctctgtcttcaacacgaaatccttcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggaatcattcctatgcctgctgagatgacatggctctgtcttcaacacgaaatccttcaa 620
Query: 421 aa 422
||
Sbjct: 621 aa 622
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
