Query= MSMg01no432_l13.b1 MSMg01no432_l13.b1 CHROMAT_FILE:
MSMg01no432_l13.b1 PHD_FILE: MSMg01no432_l13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:33 2005
(527 letters)
>mm_chr10_57554747_57555673
Length = 927
Score = 917 bits (474), Expect = 0.0
Identities = 495/502 (98%), Gaps = 1/502 (0%)
Strand = Plus / Minus
Query: 26 ccacatgttggctcacaaccatccgtaatgagatctgaggccttcttctcaggtgtctga 85
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ccacatgttggctcacaaccatccgtaatgagatctgaggccttcttctcaggtgtctga 496
Query: 86 agacagcgacagtgtacttacatgtaacaaataaatctttttcaaaaaaaagtttttttc 145
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 agacagctacagtgtacttacatgtaacaaataaatctttttcaaaaaaaagtttttttc 436
Query: 146 agacatagctgaggttatgtcaatgtggtgacatttggcaactctcaaaggaaggaagct 205
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 435 agacatagctgaggttatgtcaatgtggtgatatttggcaactctcaaaggaaggaaact 376
Query: 206 ggttagagaatgagaaacctccggcctctcattcaccccaaggcttccttctttgcctgc 265
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ggttagaggatgagaaacctcaggcctctcattcaccccaaggcttccttctttgcctgc 316
Query: 266 ttgcccttactttccagcacaattgttgcaacctacttcttcaggattccagcatataca 325
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 315 ttgcccttactttccagcacaactgttgcaacctacttcttcaggattccagcatataca 256
Query: 326 aaagaccagctgaaacacccagtcttgtggaactgagcaacaactaccaaattcttggac 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aaagaccagctgaaacacccagtcttgtggaactgagcaacaactaccaaattcttggac 196
Query: 386 ttcccattcacagctgcccattgttgggttatttggactgcagactgtaagtcatcccaa 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ttcccattcacagctgcccattgttgggttatttggactgcagactgtaagtcatcccaa 136
Query: 446 taaatttctttttt-ctttttcttttttattaggtatttatttcatttacatttccaatg 504
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 taaatttctttttttctttttcttttttattaggtatttatttcatttacatttccaatg 76
Query: 505 ctatcccaaaagtcccccacaa 526
||||||||||||||||||||||
Sbjct: 75 ctatcccaaaagtcccccacaa 54
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_l13.g1 MSMg01no432_l13.g1 CHROMAT_FILE:
MSMg01no432_l13.g1 PHD_FILE: MSMg01no432_l13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:33 2005
(478 letters)
>mm_chr10_57377953_57378830
Length = 878
Score = 903 bits (467), Expect = 0.0
Identities = 476/479 (99%), Gaps = 1/479 (0%)
Strand = Plus / Plus
Query: 1 tttgttcagctctgagccccatagttctttaacatcagtgcctgctttagaagctaacaa 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgttcagctctgagcctcatagttctttaacatcagtgcctgctttagaagctaacaa 260
Query: 61 ctttgaataattcaaattttgtacatatgaaaacatatcactagtagtaaaaatgaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctttgaataattcaaattttgtacatatgaaaacatatcactagtagtaaaaatgaaata 320
Query: 121 attacagttcttcaaatgcaatagataacaacagtagagtggtatggtgatagaatttgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attacagttcttcaaatgcaatagataacaacagtagagtggtatggtgatagaatttgc 380
Query: 181 aggaaaatgtttccagtcttatgattgtcatgtatggtgtaagaaatatggctattccac 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 aggaaaatgtttccagtcttatgattgtcatgtatggtgtaagaaagatggctattccac 440
Query: 241 ctccatctagaggcactctcattttaaaggctgaattcccaaagctaatgtgaaagggaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctccatctagaggcactctcattttaaaggctgaattcccaaagctaatgtgaaagggaa 500
Query: 301 agctatcaccatcactgtacactgatgaatttaatgttgatgataataaaagttttagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agctatcaccatcactgtacactgatgaatttaatgttgatgataataaaagttttagag 560
Query: 361 cttagtgggcaaaagcacttgccacacaagcttgtcaatatgagctcaattttgtgaagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttagtgggcaaaagcacttgccacacaagcttgtcaatatgagctcaattttgtgaagc 620
Query: 421 cacaggggggagagagaagtgactcc-gagcatagtcttctgaccttcctgcacatgtg 478
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 621 cacaggggggagagagaagtgactcctgagcatagtcttctgaccttcctgcacatgtg 679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 878
Length adjustment: 10
Effective length of query: 468
Effective length of database: 868
Effective search space: 406224
Effective search space used: 406224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
