Query= MSMg01no433_p08.b1 MSMg01no433_p08.b1 CHROMAT_FILE:
MSMg01no433_p08.b1 PHD_FILE: MSMg01no433_p08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:12 2005
(236 letters)
>mm_chr10_69993562_69994197
Length = 636
Score = 441 bits (228), Expect = e-128
Identities = 234/236 (99%)
Strand = Plus / Plus
Query: 1 tagtttaatagctatgggtagccagtcagattaacatcttaaatatagttctcctgatta 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 201 tagtttaatagctatgggtagccagtcagattaacatcttaaatagagttctcctgacta 260
Query: 61 aactgaaaatttcaaaacctaagttgcaatcacgtctaggtaaatacaagtaataggaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aactgaaaatttcaaaacctaagttgcaatcacgtctaggtaaatacaagtaataggaaa 320
Query: 121 aatgatgtgtacggatatgctaagagcgtgtcagactgtggcttaatttaatgtcaccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgatgtgtacggatatgctaagagcgtgtcagactgtggcttaatttaatgtcaccct 380
Query: 181 cgcttagcctttgaggaagctttcatttttctcattcaatccatgggaaaaaaatg 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgcttagcctttgaggaagctttcatttttctcattcaatccatgggaaaaaaatg 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no433_p08.g1 MSMg01no433_p08.g1 CHROMAT_FILE:
MSMg01no433_p08.g1 PHD_FILE: MSMg01no433_p08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:13 2005
(466 letters)
>mm_chr10_70192344_70193209
Length = 866
Score = 810 bits (419), Expect = 0.0
Identities = 455/467 (97%), Gaps = 2/467 (0%)
Strand = Plus / Minus
Query: 1 acggtgggaacacacattatttctataacaagcttccctctccttacaaagagacatttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 acggtgggaacacacattatttctataacaagcttccctctccttacaaagagacatttc 607
Query: 61 ctccagattctttttgactctcgtgcctatgtttgatgtagacacccttgagatctatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ctccagattctttttgactctcgtgcctatgtttgatgtagacacccttgagatctatgt 547
Query: 121 ccaccatgggaggcatagtcatgttattctatgtgcaaatggtactaggaagtatgccag 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 ccaccatgggaggcgtagtcatgttattctatgtgcaaatggtactaggaagtatgccag 487
Query: 181 tgagaaccagagaaatgacagcatccaagacactcgtcagcaggctggggatccagctct 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tgagaaccagagaaatgacagcatccaagacactcgtcagcaggctggggatccagctca 427
Query: 241 ttgttagagggctcat-taacccaggttcggtcccctggactttggagagagtgaatacg 299
|| ||||||||||| ||||||||||| |||||||||| ||| ||||||||||||||||
Sbjct: 426 gtggcagagggctcatataacccaggtttggtcccctggccttcggagagagtgaatacg 367
Query: 300 atgcttttaaggaaataattttttttctacctctcaagttttaagcattgtattaagtgc 359
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 atgtttttaaggaaataa-tttttttctacctctcaagttttaagcattgtattaagtgc 308
Query: 360 ttttcaaaccttatttcattttatctataaaataaccccaagaaacgaatatttacattc 419
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 307 ttttcaaaccttatttcattttatctataaaataaccccaagaaacaaatatttacattc 248
Query: 420 ccagttttccattattaagtaagctcatgttttggtgacccgagcac 466
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ccagttttccattattaagtaagctcatgttttggtgacccgagcac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
