Query= MSMg01no437_j16.b1 MSMg01no437_j16.b1 CHROMAT_FILE:
MSMg01no437_j16.b1 PHD_FILE: MSMg01no437_j16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:03 2005
(495 letters)
>mm_chr10_125123534_125124428
Length = 895
Score = 714 bits (369), Expect = 0.0
Identities = 381/385 (98%), Gaps = 1/385 (0%)
Strand = Plus / Minus
Query: 7 gaattctgtagtcttccatgttacttctgttactcatttcaaatagttaataatatcgag 66
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaattctgtagtcaaccatgttacttctgttactcatttcaaatagttaataatatcgag 326
Query: 67 gtttaacaatgtttcaaaattggtgtttgagtccaaatgatcttgagaagacatttctcc 126
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 325 gtttaacaatgtttcaaaattggtgtttgagttcaaatgatcttgagaagacatttctcc 266
Query: 127 ttctgtgcttgaaattctgtcgcaaatatatacaatttttttgtcaaattgagcacttc- 185
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttctgtgcttgaaattctgtcgcaaatatatacaatttttttgtcaaattgagcacttct 206
Query: 186 ttttttttgatttattaggtaatttcttcatttacattttcagtgctatcccaaagtcac 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ttttttttgatttattaggtaatttcttcatttacattttcagtgctatcccaaagtcac 146
Query: 246 ccataccctccctccaccgctcccctacccacccacttgcacttcttggctttggtgttc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 ccataccctccctccaccgctcccctacccacccacttgcacttcttggctttggtgttc 86
Query: 306 ccctgtactgaggcatataaagtttgcacgaccaatgggcctctctttccagtgatgacc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 ccctgtactgaggcatataaagtttgcacgaccaatgggcctctctttccagtgatgacc 26
Query: 366 gactaggcgatcttctgatacatat 390
|||||||||||||||||||||||||
Sbjct: 25 gactaggcgatcttctgatacatat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space: 429225
Effective search space used: 429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no437_j16.g1 MSMg01no437_j16.g1 CHROMAT_FILE:
MSMg01no437_j16.g1 PHD_FILE: MSMg01no437_j16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:03 2005
(248 letters)
>mm_chr10_125002507_125003154
Length = 648
Score = 464 bits (240), Expect = e-135
Identities = 246/248 (99%)
Strand = Plus / Plus
Query: 1 acgaactggtaaagtagctctgtgcttattctggaaccttgtgtttaataagtttttatg 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acgaactggtaaaatagctctgtgcttattctggaaccttgtgtttaataagtttttatg 260
Query: 61 cttacaattgaaatgtttctattcctatgagtataattcgaaataagattaggacattgg 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 cttacaattgaaatgtttctattcctatgagtataattcaaaataagattaggacattgg 320
Query: 121 agttgaaaagtggacagtggggaatctgggccgtattggagaaggtactggaatgaatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agttgaaaagtggacagtggggaatctgggccgtattggagaaggtactggaatgaatgt 380
Query: 181 gctgtcaatacattctgagatactgtaagctacatgtatgaaattctcagagtggctaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctgtcaatacattctgagatactgtaagctacatgtatgaaattctcagagtggctaaa 440
Query: 241 tattatat 248
||||||||
Sbjct: 441 tattatat 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
