Query= MSMg01no437_n07.b1 MSMg01no437_n07.b1 CHROMAT_FILE:
MSMg01no437_n07.b1 PHD_FILE: MSMg01no437_n07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:21 2005
(441 letters)
>mm_chr10_114839930_114840769
Length = 840
Score = 627 bits (324), Expect = 0.0
Identities = 346/362 (95%), Gaps = 16/362 (4%)
Strand = Plus / Minus
Query: 94 ggctcagcagttaacagcaccgactggccttccagatagacctggattcaaatcctagca 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 ggctcagcagttaacagcaccgactggccttccagatagacctggattcaaatcctagca 781
Query: 154 ctcacatggcagctcacaactgtcggtaactccaaggtctgacactttctttcatataga 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 ctcacatggcagctcacaactgtcggtaactccaaggtctgacactttctttcatataga 721
Query: 214 catacatgcaggcaaaatactaacgcacataaaataaagggaaataaattaaaagtaaaa 273
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 720 catacatgcaggcaaaatactaacgcacat-aaataaagggaaataaattaaaagtaaaa 662
Query: 274 ctgtttc--------------ttaagttttaatttaaatctctttagaaaagcacacttg 319
||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 661 ctgtttcttttaatttttaatttaa-ttttaatttaaatctctttagaaaagcacacttg 603
Query: 320 aaaacaaagattaaactatacaacagagatttactctaagtttttacagtattatataaa 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aaaacaaagattaaactatacaacagagatttactctaagtttttacagtattatataaa 543
Query: 380 agtcatcaataaatctcaacttccttaagacatttctctgaaggttggagtagcttaatt 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 agtcatcaataaatctcaacttccttaagacatttctctgaaggttggagtagcttaatt 483
Query: 440 gt 441
||
Sbjct: 482 gt 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 840
Length adjustment: 9
Effective length of query: 432
Effective length of database: 831
Effective search space: 358992
Effective search space used: 358992
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no437_n07.g1 MSMg01no437_n07.g1 CHROMAT_FILE:
MSMg01no437_n07.g1 PHD_FILE: MSMg01no437_n07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:21 2005
(468 letters)
>mm_chr10_114654805_114655672
Length = 868
Score = 890 bits (460), Expect = 0.0
Identities = 466/468 (99%)
Strand = Plus / Plus
Query: 1 aaataaccttttaaacccaacgttaaaagttattttcctgttttattactagaaaacttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaataaccttttaaacccaacgttaaaagttattttcctgttttattactagaaaacttg 260
Query: 61 ttaatataaaaagaaaggacaaagacctttgatatgcacataatggttgaaaatagttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaatataaaaagaaaggacaaagacctttgatatgcacataatggttgaaaatagttta 320
Query: 121 aagtcaaaggtaagacataaaaatacctgggaagttagctatatttctctacaagaataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagtcaaaggtaagacataaaaatacctgggaagttagctatatttctctacaagaataa 380
Query: 181 gaaatagacgctttcttttatgtgaccattgtatgagcacatgaaaataacttatagtta 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaagagacgctttcttttatgtgaccattgtatgagcacatgaaaataacttatagtta 440
Query: 241 atataaacagcaaatacacgtataacccaattctacaatttcataactaaattataaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atataaacagcaaatacacgtataacccaattctacaatttcataactaaattataaaac 500
Query: 301 caacagaaatgagtactataccttatagctaaatagttgtctttatgcaaagctagcaca 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 501 caacagaaatgagtactataccttatatctaaatagttgtctttatgcaaagctagcaca 560
Query: 361 gaaaacttggaccttctaccatgtttacatagtcacaaacatagctgtaacaagatcctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaaaacttggaccttctaccatgtttacatagtcacaaacatagctgtaacaagatcctt 620
Query: 421 ctaaataagtgtttctgacttgaaataattacattgcttctaattttt 468
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctaaataagtgtttctgacttgaaataattacattgcttctaattttt 668
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space: 392964
Effective search space used: 392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
