Query= MSMg01no438_h05.b1 MSMg01no438_h05.b1 CHROMAT_FILE:
MSMg01no438_h05.b1 PHD_FILE: MSMg01no438_h05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:14 2005
(519 letters)
>mm_chr10_116171141_116172059
Length = 919
Score = 810 bits (419), Expect = 0.0
Identities = 507/567 (89%), Gaps = 53/567 (9%)
Strand = Plus / Plus
Query: 5 gaattccaactgtgatcccgacactgctagttctgggacacacttggggcctttcttcct 64
||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 154 gaattccaactgtgagcaagacactgctagttctgggacacactt-gggcctttcttcct 212
Query: 65 ctgggggagaaaaaacaaaaa--acaaaacaaaacaaaacaaaacaa----aacaacaac 118
||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 213 ctgggtgagaaaaaacaaaaaacacaaaacaaaacaaaacaaaacaacaacaacaacaac 272
Query: 119 -aacaacaaaaa-cccagccgggtgtgagacaaataggctctgctgtttttgaaggacac 176
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 aaacaacaaaaatcccagccgggtgtgagacaaataggctctgctgtttttgaaggacac 332
Query: 177 aggttcaagtgagaaaaatagatagctcaggtataaataaattcactcatccagccaagc 236
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 333 aggttcaagtgagaaaaatagatagctcaggtataaataaattcactcatccaaccaagc 392
Query: 237 acaagtgctttctatactacaacaatagcacagccctccacagcacatgggcagcgcatg 296
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 acaagtgctttctatactgcaacaatagcacagccctccacagcacatgggcagcgcatg 452
Query: 297 ggcagcgcatgggcagcgcatgggcagcgcatgggcag----tg---------------- 336
|||||||||||||||||||||||||||||||||||||| ||
Sbjct: 453 ggcagcgcatgggcagcgcatgggcagcgcatgggcagcgcatgggcagttcatgggcag 512
Query: 337 ------------------------catgggcagcgcataggcagtgcatgggcagcgcat 372
||||||||||||||||||||||||||||||||||||
Sbjct: 513 cgcatgggcagcgcatgggcagcgcatgggcagcgcataggcagtgcatgggcagcgcat 572
Query: 373 gggcagttccagcctcaggtaaacaagtgccttgtgcttaaatagtaaaaaacttttgtc 432
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gggcagttccaggctcaggtaaacaagtgccttgtgcttaaatagtaaaaaacttttgtc 632
Query: 433 tacttcatttttgttgcctctcacagttttctatgttattatgaaagatttgaatcttat 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 tacttcatttttgttgcctctcacagttttctatgttattatgaaagatttgaatcttat 692
Query: 493 gaataacaatacaacaaatatccttaa 519
|||||||||||||||||||||||||||
Sbjct: 693 gaataacaatacaacaaatatccttaa 719
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 59
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no438_h05.g1 MSMg01no438_h05.g1 CHROMAT_FILE:
MSMg01no438_h05.g1 PHD_FILE: MSMg01no438_h05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:14 2005
(349 letters)
>mm_chr10_116351368_116352116
Length = 749
Score = 625 bits (323), Expect = 0.0
Identities = 341/347 (98%)
Strand = Plus / Minus
Query: 1 agtcctcagaatcttccatgactctggagagggttgagctgtatcgtccttgtaaggaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 agtcctcagaatcttccatgactctggagagggttgagctgtatcgtccttgtaaggaga 488
Query: 61 actgtgcacgagcagcttggcaccgacccgagcgtgggctgtgcattgcagcctgttccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 actgtgcacgagcagcttggcaccgacccgagcgtgggctgtgcattgcagcctgttccc 428
Query: 121 tagcgctggtagccacagcagactcaactctgcccttcttactggctgcccgtggagggc 180
||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 427 tagcgctcgtagccgcagcagactcaactctgaccttcttactggctgcccgtggagggc 368
Query: 181 actccatatctcatctcatctgggagattgttgtgcctgtaagacagaagttgagaaaat 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 367 actccatatctcatctcatctgggagattgttgtgcctataagacagaagttgagaaaat 308
Query: 241 atgtagctaaaattactatatattgctgtcataaatgaccagtgtttattgtataaattt 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 307 atgtagctaaaattactatatattgctgtcataaatgaccagtatttattgtataaattt 248
Query: 301 agagggtaaagcattaggatattaattttgaagtggcttttatatag 347
||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 247 agagggtaaagcattaggatattaattttgaagtggcttgtatatag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 749
Length adjustment: 9
Effective length of query: 340
Effective length of database: 740
Effective search space: 251600
Effective search space used: 251600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
