Query= MSMg01no438_l13.b1 MSMg01no438_l13.b1 CHROMAT_FILE:
MSMg01no438_l13.b1 PHD_FILE: MSMg01no438_l13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:36 2005
(474 letters)
>mm_chr10_96063354_96064227
Length = 874
Score = 721 bits (373), Expect = 0.0
Identities = 429/456 (94%), Gaps = 18/456 (3%)
Strand = Plus / Plus
Query: 32 tatatatatat------accatatatatatatatatat-------atatatatatatata 78
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Sbjct: 224 tatatatatatacacacaccatat-tttatatatatatacacaccatat-tatatgtata 281
Query: 79 taccatattatatatattatatatatcatatcataccatatgttatatacatatcatata 138
|||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||
Sbjct: 282 taccatattatatatattatatatataatat-at--catatgttatatacatatcatata 338
Query: 139 tttatgatacacacacaaaagaggtggttctctgaacaggaactaggcctccaacagaca 198
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Sbjct: 339 tttatgatacacacacaaaagaggtggttctctgaacaggaactaggcctccaacagaca 398
Query: 199 ccagacctgttggtgtctggaccatggacttcccaaattctagaactgagagaatgcctg 258
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 399 ccagacctgttggtgtctggaccatgaacttcccagattctagaactgagagaatgcctg 458
Query: 259 ttggtggaccccactccagaggcccagactggcatagcctcccttgaggatctacacatt 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ttggtggaccccactccagaggcccagactggcatagcctcccttgaggatctacacatt 518
Query: 319 gcttacattttttcccattggtttttattttagcaatgtaagcgaagtggaatttgttct 378
||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||
Sbjct: 519 gcttacattttttcccattggcttttattttagcaatgtaagcaaagtggaatttattct 578
Query: 379 atatacaacgtagccctcaagttttcctctgcagagccaggacaccagactcagtaaaat 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 atatacaacgtagccctcaagttttcctctgcagagccaggacaccagactcagtaaaat 638
Query: 439 anatacccactcaggctctgaaagcacccctccctg 474
| ||||||||||||||||||||||||||||||||||
Sbjct: 639 aaatacccactcaggctctgaaagcacccctccctg 674
Score = 80.0 bits (41), Expect = 3e-19
Identities = 46/49 (93%), Gaps = 3/49 (6%)
Strand = Plus / Minus
Query: 32 tatatatatataccatatatatatatatatatatatatatatatatata 80
||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 233 tatatatatat---atatatatatatatatatatatatatatatatata 188
Score = 74.2 bits (38), Expect = 2e-17
Identities = 46/50 (92%), Gaps = 4/50 (8%)
Strand = Plus / Minus
Query: 47 tatatatatatatatatatatatatatatatataccatat-tatatatat 95
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Sbjct: 235 tatatatatatatatatatatatatatatatata---tatatatatatat 189
Score = 72.3 bits (37), Expect = 7e-17
Identities = 42/45 (93%), Gaps = 3/45 (6%)
Strand = Plus / Minus
Query: 36 tatatataccatatatatatatatatatatatatatatatatata 80
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Sbjct: 235 tatatat---atatatatatatatatatatatatatatatatata 194
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 139
Number of extensions: 30
Number of successful extensions: 30
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 5
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space: 400896
Effective search space used: 400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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