Query= MSMg01no439_e03.b1 MSMg01no439_e03.b1 CHROMAT_FILE:
MSMg01no439_e03.b1 PHD_FILE: MSMg01no439_e03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:20 2005
(503 letters)
>mm_chr10_40218955_40219859
Length = 905
Score = 862 bits (446), Expect = 0.0
Identities = 468/476 (98%), Gaps = 2/476 (0%)
Strand = Plus / Minus
Query: 25 gtctgaaagaggaaggttgtgaaactgggtcaggaggaggcgtctggtgataaaacacac 84
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 510 gtctgaaagaggaaggttgtgaaactgggtcaggaggaggcgtctgatgataaaacacac 451
Query: 85 tttctgttcagcgatgagggacggattccaaacatatatagcagaccgtacactgaccct 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tttctgttcagcgatgagggacggattccaaacatatatagcagaccgtacactgaccct 391
Query: 145 gtggcaggtgaaggagccttcagactctgttagc--tttgaccctgggaaaaaagcttca 202
|||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 390 gtggcaggtgaaggagccttcagactctgtgagctttttgaccctgggaaaaaagcttca 331
Query: 203 ctggggtgagacatgcgggagcaggcacagctggctgacaggtcttctgcccgttgatag 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ctggggtgagacatgcgggagcaggcacagctggctgacaggtcttctgcccgttgatag 271
Query: 263 gtccctgcctcgtcacgtggacaggaaaatgataacaacttctttaggctggagagatgg 322
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 270 gtccctgcctcgtcacgtggacaggaaaatgatagcgacttctttaggctggagagatgg 211
Query: 323 cttgaaagggtggagcatattccattctagcagaagacttgagttcagttcccagggccc 382
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 210 cttgaaagggtggagcatattccattctagcagaagacttaagttcagttcccagggccc 151
Query: 383 acttcaggctgctcacgcccctgttaacccagccccaggaggcctgatgccctcttctgg 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 acttcaggctgctcacgcccctgttaacccagccccaggaggcctgatgccctcttctgg 91
Query: 443 tccttgcaggcacttgtacctgcatacacacacacacacacacacacacacacaca 498
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 90 tccttgcaggcacttgtgcctgcatacacacacacacacacacacacacacacaca 35
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 7
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 905
Length adjustment: 10
Effective length of query: 493
Effective length of database: 895
Effective search space: 441235
Effective search space used: 441235
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_e03.g1 MSMg01no439_e03.g1 CHROMAT_FILE:
MSMg01no439_e03.g1 PHD_FILE: MSMg01no439_e03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:20 2005
(335 letters)
>mm_chr10_40034450_40035184
Length = 735
Score = 617 bits (319), Expect = 0.0
Identities = 331/335 (98%), Gaps = 3/335 (0%)
Strand = Plus / Plus
Query: 1 ttccttgtaggttcccctctccccgcctgactacaatatgcttaggtttggatatgactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttccttgtaggttcccctctccccgcctgactacaatatgcttaggtttggatatgactt 260
Query: 61 ttatttctacatgaattatacattata-tatgagttcatttttgtctagtgaattaactg 119
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 261 ttatttctacatgaattatacattatact-tgagttcatttttgtctagtgaattaactg 319
Query: 120 attaatttaaccatttgttcattcaacaaat-ttttttttaaatatttatttatttatta 178
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 320 attaatttaaccatttgttcattcaacaaatattttttttaaatatttatttatttatta 379
Query: 179 tatgtaaatacactgtagctgtcttcagacacaccagaagagggagtcagatcttgttac 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tatgtaaatacactgtagctgtcttcagacacaccagaagagggagtcagatcttgttac 439
Query: 239 ggatgtttgtgagccaccatgtggttgctgggatttgaactctggaccttcggaagagca 298
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggatggttgtgagccaccatgtggttgctgggatttgaactctggaccttcggaagagca 499
Query: 299 gtcgggtgctcttacccactgagccatctcaccag 333
|||||||||||||||||||||||||||||||||||
Sbjct: 500 gtcgggtgctcttacccactgagccatctcaccag 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 735
Length adjustment: 9
Effective length of query: 326
Effective length of database: 726
Effective search space: 236676
Effective search space used: 236676
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
