Query= MSMg01no443_m16.b1 MSMg01no443_m16.b1 CHROMAT_FILE:
MSMg01no443_m16.b1 PHD_FILE: MSMg01no443_m16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:29 2005
(404 letters)
>mm_chr10_17875695_17876498
Length = 804
Score = 456 bits (236), Expect = e-133
Identities = 311/348 (89%), Gaps = 26/348 (7%)
Strand = Plus / Minus
Query: 62 gagcttgtggagccctgggagttccaggccagtctggccaacatatcgagttcctggaag 121
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gagcttgtggagctctgggagttccaggccagtctggccaacatatcgagttcctggaag 745
Query: 122 gccatggg-ctacataatgagactgtctcaataagtcaaccaaccaaaaca---gttctt 177
|||||||| || |||||||||||||||||||||| |||| |||| |||||| ||||||
Sbjct: 744 gccatgggcct-cataatgagactgtctcaataaatcaa-caacaaaaacagttgttctt 687
Query: 178 tctcctttcctccttctcctcttccccctcttcttcctcctcctccccctccccctcttc 237
||||||| |||||||||||||||||||||| |||||||||| ||||||
Sbjct: 686 tctccttccctccttctcctcttccccctcctcttcctcct------------cctctt- 640
Query: 238 ttctccctcctccccatctccctcctcctcaccattg-ttatgttcagaatctccacgct 296
||||| |||| |||||||||||||||||| || || |||||||||||||||||||
Sbjct: 639 -----cctccgccccctctccctcctcctcaccagtgctt-tgttcagaatctccacgct 586
Query: 297 cttatttccatgaaataatcataattcattgtcatttgcaaagctgatttattccatgga 356
||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 585 cttgcttccatgaaataatcagaattcattgtcatttgcaaagctgatttattccatgga 526
Query: 357 atatacaatttaagaaccatttatgctcaggttaaaaatatttgaggg 404
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 atatacaatttaagaaccatttatgctcaggttaaaaatatttgaggg 478
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 804
Length adjustment: 9
Effective length of query: 395
Effective length of database: 795
Effective search space: 314025
Effective search space used: 314025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no443_m16.g1 MSMg01no443_m16.g1 CHROMAT_FILE:
MSMg01no443_m16.g1 PHD_FILE: MSMg01no443_m16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:30 2005
(453 letters)
>mm_chr10_17711701_17712553
Length = 853
Score = 694 bits (359), Expect = 0.0
Identities = 383/391 (97%)
Strand = Plus / Plus
Query: 63 tcagtgggaaagacccttgctttacaagcatgcaggcttgaattcaaattctgtgtgcat 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tcagtgggaaagacccttgctttacaagcatgcaggcttgaattcaaattctgtgtgcat 322
Query: 123 ttatagtcttggtaccatggacaggtgtagaccgaagattgctggggcttgctggccacc 182
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 323 ttatagtcttggtaccatggacaggtgtagacagaagattgctggggcttgctggccacc 382
Query: 183 agcctatccaggttcagtaagagactgtctcaagggaaacaagagagagaatgacaaagc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 agcctatccaggttcagtaagagactgtctcaagggaaacaagagagagaatgacaaagc 442
Query: 243 atgatatcaatgccctctgggcttgtgtacagtgcacacatttgtgcaaaccacatactc 302
| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 443 aggatatcaatgccctctgggcttgtgtacactgcacacatttgtgcaaaccacatactc 502
Query: 303 acgaaacacaatcataagcagggtagatacaagtctggaaagcacccttcttccagtcag 362
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 atgaaacacaatcataagcagggtagatacaagtctggaaagcacccttcttccagtcag 562
Query: 363 cagtcattcccacctactcgttagttctgctctgaagcattgtgtctggactgtaaggct 422
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 563 cagtcactcccacctactcgtcagttctgctctgaagcattgtgtctggactgtaaggct 622
Query: 423 ctcctgtgataaaatgtgaacacgatggggc 453
|| ||||||||||||| ||||||||||||||
Sbjct: 623 cttctgtgataaaatgcgaacacgatggggc 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
