NNNAAAGCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCTGCACGCATTTCCCGCACAGAAATCCACACAATTATA
CCTGCTCGCACACAGAAAAATAAAAGAGAAATAAATAATTTTACAAATTG
TATAGGTAAGGGCTGGTGAGAAGGCTTAGCAGTTAAGAGCACTGACTGCT
CTTCCAGAGGTCCTGAGTTCAATTCTCAGCAACCACATGGTGGCTCACAG
CCATCCGTAATGAGATCTGACGCCCTCTTCTGGTGTGTCTGAAGACAGCT
ACAGTGTACTCACATATAACAATAAATAAATAATATTGGGCCGGAGCGAG
CGGGGCCAGAGGGAGCAGGGCTGGTGCGAGCTAGTGGGCCAGAGCGAACA
GAGGTCCTGTGTTCAATTCCCAGAAACGACATGATGGCTCACAATCATAT
ATACAGCTACAGTGTACTCATATACATAAAATAAATAAATAAATCTTTTT
TAGAAATTGTGTAGGAAAAGAAGAATGAAAATTTAATAAGAGCTACGTAC
CCTTTTAAATTTTTCATTGTCCCTTTTCTTGTTGTTGGAGCATTGGCTAT
CTCCATTCCAGCTGTTACAGGTGGGTATTTTAAAAAAACAGATAGCTTTC
AAAGCCTTAATGGGGCCAGTATTTACCATTTGGATCCCAAGCCCAACACT
CAGGTACCTTTATATAAGTCCCAGAAGTTATAAAAATTGTACTTGCCTAT
GTTGGGG

NAAAATATTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACTCTGTAGACCAGG
CTGGCCTCAAATGCATGGAGATCTACCTGCCTCTGCCTCCCCAGTGCTGG
GATTAAAGGCTTTAAATGTAAAAGCTTAGAATTTTCATGTGCTTAGAATC
AGGAGTTATTTGCATCGTTTACAAGCTAGGACAGAGGGGATGGCTCAGTG
GGTCAAGGTTTTGCTGTGCAAGCATGAGGATCTGGGTTCAAAGCCTCCAG
CAGTCATTTAAAGCAGGTGCTGCAGGGGGTGCCTGTGCTAAGGATGGAGC
AGAAGCAGGTGGGATGCTGGCCAGTCTGTCTAGCGGAGACAGTGAGCTTT
AGGTTTAGTGAGACATGTTTCAAAACTGAGGTAGATCTGAGACACCTGAC
AGGTCACCCACGCACATGTGCACACACCTGCATGTACCACACACACATGT
AAATAAGTAAATACAAACAGAACCCAAGCTCTAGAAACCAGCGTCTGTAT
TTGGCAGGGTATTCTTAAAGAATAGAACTGTCCCCCACCCCATCCCTTTG
GGTGGGGGGGGGGTGGGGGCCCGGGGATGCCCGTCGTCTTATAAAAAACG
CCACATTCATTTTTTCCCTCTTCTCTCCTCGTTCACTTACATCCCTATTC
NTTTTCCTTTTATAATATTTCTTACTCCTCCCTTTACTTTTTTCCTCCTC
CCTATC

Query= MSMg01no447_a23.b1 MSMg01no447_a23.b1 CHROMAT_FILE:
MSMg01no447_a23.b1 PHD_FILE: MSMg01no447_a23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:46 2005
         (534 letters)



>mm_chr10_116209608_116210541
          Length = 934

 Score = 1002 bits (518), Expect = 0.0
 Identities = 530/534 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   acagaaatccacacaattatacctgctcgcacacagaaaaataaaagagaaataaataat 60
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 acagaaatccacacaattatacctgctcacacacagaaaaataaaagagaaataaataat 260

                                                                       
Query: 61  tttacaaattgtataggtaagggctggtgagaaggcttagcagttaagagcactgactgc 120
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttacaaagtgtataggtaagggctggtgagaaggcttagcagttaagagcactgactgc 320

                                                                       
Query: 121 tcttccagaggtcctgagttcaattctcagcaaccacatggtggctcacagccatccgta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcttccagaggtcctgagttcaattctcagcaaccacatggtggctcacagccatccgta 380

                                                                       
Query: 181 atgagatctgacgccctcttctggtgtgtctgaagacagctacagtgtactcacatataa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgagatctgacgccctcttctggtgtgtctgaagacagctacagtgtactcacatataa 440

                                                                       
Query: 241 caataaataaataatattgggccggagcgagcggggccagagggagcagggctggtgcga 300
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 441 caataaataaataatattgggccggagcaagcggggccagagggagcagggctggtgcga 500

                                                                       
Query: 301 gctagtgggccagagcgaacagaggtcctgtgttcaattcccagaaacgacatgatggct 360
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctagtgggccagagcgagcagaggtcctgtgttcaattcccagaaacgacatgatggct 560

                                                                       
Query: 361 cacaatcatatatacagctacagtgtactcatatacataaaataaataaataaatctttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cacaatcatatatacagctacagtgtactcatatacataaaataaataaataaatctttt 620

                                                                       
Query: 421 ttagaaattgtgtaggaaaagaagaatgaaaatttaataagagctacgtacccttttaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttagaaattgtgtaggaaaagaagaatgaaaatttaataagagctacgtacccttttaaa 680

                                                                 
Query: 481 tttttcattgtcccttttcttgttgttggagcattggctatctccattccagct 534
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tttttcattgtcccttttcttgttgttggagcattggctatctccattccagct 734


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space:   484176
Effective search space used:   484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)