NNNNNTTATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGA
ATCCGCGGAATTCCTCATGAGTTTCTAGATGCTGGTAAGATATTTCTCCT
CCCTCTATTTTTACATAGCATTCCTTGTTTGCAGCAGAGAGTTGACCAGA
ACCTAATTAGCCTTTGTACCTTGGCACAACTCTTCTTTATCCCAAGGTCC
TTAGCATTCAGGATATTCCCGGCACATCAAGGAAATCAAGATGTTGACAG
ATGACTAAGGAGAAACCTCCCCTCCCCGTGTCAAAACTCCCTTACAGCTT
TGCACATGTTAACAATGTTTTCCTACCTCGATGATTATTCCCCCAAGTCT
ACCACATGCTTTGTTACCTCGCTTATCACAAAGTTCTGGCTGTCAGCCAT
TCCTATAGATGCTATGAGCAATGGTTTTATTCTCTATGATACTACGTGAA
TCACTCATTTATCTTGCCTTCATCTGTAGCCTGTGCTCATCGGAGCTTCT
GCTATCCTTGTATCTTTTCTGCTTTTTCCTGCCACATGAGAACTTTTATC
TGACTGCCACTTTCCCTAACACCCAGTTCTGTGTTCACCATTCCTAACTC
ACCTTGGTCCCTTACCTAAGGTAGTACCATAGCACTGGATAAACAACACA
AATTCCGTCACTCAAGTTCAAGAACCAGGTCCAACCCTATTCACATAACC
CCGCGATGTTCCCTCCTGGGTCATGGCCTCCTTTTCTTCTCTCTAAGGGG
GGG

GGAATGTTCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTTCCCCACCCATGGC
TCCTTTTTACTTTCTTTGTTTCTGTAATTACTCCAGGCTATGCACTCACC
TCTAAAGTTTCAGAGTTAGGATTCCCAGATAAGAGAGAACATCCAACCTT
AGCTTTTCAGGGTCTTGATTACCTTACTCAGTATAATATTTCATCATTTA
TCTGAAAATTTCATGGTTTCATTTTTTAAAATTTTTCATGGTTTTATTTT
TACTTATATGAGTACACTGTAGCTATCTTCAGAAACTCTCCAGAAGACTA
TGTAAGATCCCATTACAGATGATTGTGAGCCACCATGTGGTTGCTACGAA
TTGAACTCAGGACCTTTGGAAGAGTAGTCAGTGCTCTTAACCACTGAGCC
ATCTCTCCAGCCATCATGGTTTCATTTTTTTTTTCAGTAAAATAGAGGTC
TATTATATTTATGTATTATTCTTTCATTACCCATTGTTATTTGGAGGACA
TGTAAGTTATTTCTATCCTAGCTGTTGTAGGTACATTAGCAATGAATATG
GCTGACCCAGTATTTGTGGAGAAGGGTGGCCAGTCCCTTTGGGATAATGC
CAGGAAAGGGGGGAAAAAATCCTAAAAATTTATAACTCACCGGGGGAGAG
GGGGGCTTTTTTTTGGGAATCCTCCCATTTTCTAAAGGAAGAGCCCCTAT
TTGGTGGGTGTAAAAATAGGG

Query= MSMg01no449_l23.b1 MSMg01no449_l23.b1 CHROMAT_FILE:
MSMg01no449_l23.b1 PHD_FILE: MSMg01no449_l23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:27 2005
         (520 letters)



>mm_chr10_89725175_89726095
          Length = 921

 Score =  946 bits (489), Expect = 0.0
 Identities = 513/523 (98%), Gaps = 5/523 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   taagatatttctcctccctctatttttacatagcattccttgtttgcagcagagagttga 60
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 721 taagatatttctcctccctctatttttacacagcattccttgtttgcagcagagagttga 662

                                                                       
Query: 61  ccagaacctaattagcctttgtaccttggcacaactcttctttatcccaaggtccttagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ccagaacctaattagcctttgtaccttggcacaactcttctttatcccaaggtccttagc 602

                                                                       
Query: 121 attcaggatattcccggcacatcaaggaaatcaagatgttgacagatgactaaggagaaa 180
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 601 attcaggatattcccggcacatcaaggaaataaagatgttgacagatgactaaggagaaa 542

                                                                       
Query: 181 cctcccctccccgtgtcaaaactcccttacagctttgcacatgttaacaatgttttccta 240
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cctccccttcccgtgtcaaaactcccttacagctttgcacatgttaacaatgttttccta 482

                                                                       
Query: 241 cctcgatga---ttattcccccaagtctaccacatgctttgttacctcgcttatcacaaa 297
           |||||||||     |||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 481 cctcgatgagcc--attccctcaagtctaccacgtgctttgttacctcgcttatcacaaa 424

                                                                       
Query: 298 gttctggctgtcagccattcctatagatgctatgagcaatggttttattctctatgatac 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gttctggctgtcagccattcctatagatgctatgagcaatggttttattctctatgatac 364

                                                                       
Query: 358 tacgtgaatcactcatttatcttgccttcatctgtagcctgtgctcatcggagcttctgc 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tacgtgaatcactcatttatcttgccttcatctgtagcctgtgctcatcggagcttctgc 304

                                                                       
Query: 418 tatccttgtatcttttctgctttttcctgccacatgagaacttttatctgactgccactt 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tatccttgtatcttttctgctttttcctgccacatgagaacttttatctgactgccactt 244

                                                      
Query: 478 tccctaacacccagttctgtgttcaccattcctaactcacctt 520
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tccctaacacccagttctgtgttcaccattcctaactcacctt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 921
Length adjustment: 10
Effective length of query: 510
Effective length of database: 911
Effective search space:   464610
Effective search space used:   464610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)