Query= MSMg01no451_b17.b1 MSMg01no451_b17.b1 CHROMAT_FILE:
MSMg01no451_b17.b1 PHD_FILE: MSMg01no451_b17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:14 2005
(651 letters)
>mm_chr10_71722084_71723131
Length = 1048
Score = 1143 bits (591), Expect = 0.0
Identities = 632/647 (97%), Gaps = 3/647 (0%)
Strand = Plus / Plus
Query: 5 gaattcctccacaataaatctttctttctttgagcattcaattcaggtaatttagcacag 64
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 205 gaattcctccacaataaatctttctttctttgagcattcaattcaggtattttagcacag 264
Query: 65 tgtaaaaaagagagtacctccccttctttttctcttactcaattagcttagttgccatca 124
| |||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 265 tataaaaaagtgagtacctccccttctttttctcttactcaattagcttatttgtcatca 324
Query: 125 tggttatggatatttgctgaaaatgatttctaataaaatcacaatctattagccttctac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tggttatggatatttgctgaaaatgatttctaataaaatcacaatctattagccttctac 384
Query: 185 ttcttccatagctccaccttgttatatcaagtaacttctaattcctataatccactttaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttcttccatagctccaccttgttatatcaagtaacttctaattcctataatccactttaa 444
Query: 245 agcacaaaaatatgaagataaaataaactaagaagaatatgtttgtgtggtctttagtaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agcacaaaaatatgaagataaaataaactaagaagaatatgtttgtgtggtctttagtaa 504
Query: 305 ctatgatatgtgttggccaagaaattagtagaaagtattaaatcattatgcctgctaata 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctatgatatgtgttggccaagaaattagtagaaagtattaaatcattatgcctgctaata 564
Query: 365 tttatccaggagcagaataattctaccaaagatgaatactaatatcctaaagtcagcact 424
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 565 tttatccaggagcagaataattctgccaaagatgaatactaatatcctaaagtcagcact 624
Query: 425 gggctttcattttgggtgcactttattaaatatattcatgtctcaatggaattgctgaag 484
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gggctttcattttgggtacactttattaaatatattcatgtctcaatggaattgctgaag 684
Query: 485 agtataattaattgtgccatatgttttgaaataatcttccataacaaaatgctagttgtg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agtataattaattgtgccatatgttttgaaataatcttccataacaaaatgctagttgtg 744
Query: 545 ggattctaattttatatttttaagttatagtagtactcttcttacatgaaaattgtgatt 604
|||||||||||||||||||||||||||||||||||||| ||||| ||||||| | |||||
Sbjct: 745 ggattctaattttatatttttaagttatagtagtactcctcttatatgaaaaatatgatt 804
Query: 605 attaacaaaagaagaatagaaactatattaaaattacaatttttaac 651
||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 805 attaacaaaagaa---tagaaactatattaaaactacaatttttaac 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1048
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1038
Effective search space: 665358
Effective search space used: 665358
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no451_b17.g1 MSMg01no451_b17.g1 CHROMAT_FILE:
MSMg01no451_b17.g1 PHD_FILE: MSMg01no451_b17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:14 2005
(556 letters)
>mm_chr10_71814714_71815666
Length = 953
Score = 1021 bits (528), Expect = 0.0
Identities = 548/556 (98%), Gaps = 3/556 (0%)
Strand = Plus / Minus
Query: 1 tttaagagaaggaggggtctaatgagcccagtcagtttcaggaacttcctgaagctattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 tttaagagaaggaggggtctaatgagcccagtcagtttcaggaacttcctgaagctattt 830
Query: 61 tgacttgtttactttccatattcgtgtgtttccttccagaataaaatgttttactcttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 tgacttgtttactttccatattcgtgtgtttccttccagaataaaatgttttactcttgc 770
Query: 121 agactactacaaaacaggaagagggtaaaattgtttcaaaaattcataatttggactttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 agactactacaaaacaggaagagggtaaaattgtttcaaaaattcataatttggactttg 710
Query: 181 gtgattcctacagatgtacacattcaatgtcaaattgtaggggaaaaaaaggtagtcagc 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 709 gtgattcctacagatgtacacatttaatgtcaaattgtaggggaaaaaaaggtagtcagc 650
Query: 241 ttatcatgtagtaaagaaaagcagttaatctccagaagtaatatatctcaattgtactca 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 649 ttatcatgtagtaaagaaaagcagttaatctccagaagtaatatatctcaattgta---a 593
Query: 301 cagacttgaaggtgctatatctgaaaagaagtggaactatgtagattctaaaatgtctat 360
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 cagacttgaaggtgctatggctgaaaagaagtggaactatgtagattctaaaatgtctat 533
Query: 361 gcgtctgggacttccatatgactaaaacaaagaattttatccttacacaaaaagaaataa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 gcgtctgggacttccatatgactaaaacaaagaattttatccttacacaaaaagaaataa 473
Query: 421 ggcacagagtaatgagaaagagtagaagatgcacaagatgtcctgctcatgaattcattg 480
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ggcacagagcaatgagaaagagtagaagatgcacaagatgtcctgctcatgaattcattg 413
Query: 481 gtgtccagttttcagctagaatttatgttaaactcacctatacacatttgctcaaatatg 540
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 gtgtctagttttcagctagaatttatgttaaactcacctatacacatttgctcaaatatg 353
Query: 541 cttcactgtatttaca 556
||||||||||||||||
Sbjct: 352 cttcactgtatttaca 337
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 953
Length adjustment: 10
Effective length of query: 546
Effective length of database: 943
Effective search space: 514878
Effective search space used: 514878
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
