Query= MSMg01no451_i18.b1 MSMg01no451_i18.b1 CHROMAT_FILE:
MSMg01no451_i18.b1 PHD_FILE: MSMg01no451_i18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:50 2005
(722 letters)
>mm_chr10_55434575_55435696
Length = 1122
Score = 1007 bits (521), Expect = 0.0
Identities = 551/561 (98%), Gaps = 1/561 (0%)
Strand = Plus / Plus
Query: 8 ggaattcagcagacttctctggatcctttggtggagaaagcatggcagtgtccttaggat 67
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ggaattcagcagacaggtctggatcctttggtggagaaagcatggcagtgtccttaggat 267
Query: 68 aaccgtacaaaacacaaaatacagtggacagtgtaacctgtcatcatcaccatcgttctg 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 aaccgtacaaaacacaaaatacagtggacagtgtaacctgtcatcatcaccatcgttctg 327
Query: 128 gtgcaatgaacaatctttactaatttgcttacaataacaaaatgaaagtaagccggacgt 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gtgcaatgaacaatctttactaatttgcttacaataacaaaatgaaagtaagccggacgt 387
Query: 188 ggtggcgcacgcctttaatcccagcactcgggaggcagaggcaggtggatttctgagttc 247
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 388 ggtggcgcacgcctttaatccaagcactcgggaggcagaggcaggtggatttctgagttt 447
Query: 248 aaggccagcctggtctaccgagtgagttccaggacagccaaggctacacaaagaaaccct 307
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 448 gaggccagcctggtctaccgagtgagttccaggacagccaaagctacacaaagaaaccct 507
Query: 308 gtctcaaaaaaaccaaattaaaaaaataaaatgaaagtaatgaagatgcatactgatact 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gtctcaaaaaaaccaaattaaaaaaataaaatgaaagtaatgaagatgcatactgatact 567
Query: 368 agtaattagtaatttaaatgtgacaaagttcaattggcacaaaataaatgaatagacaga 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 agtaattagtaatttaaatgtgacaaagttcaattggcacaaaataaatgaatagacaga 627
Query: 428 tatgtaatatagcaaaacaaataatataacacagcatgaatgtccatgtttgacaattag 487
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 tatgtaatatagcaaaacaaataatataacacagcatgaatgtccatgtttgacaattaa 687
Query: 488 gaagaaataattgggaacattaaaaaaaagtggctagtggacacaaataatcatatatga 547
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 688 gaagaaataattgggaacattaaaaaaa-gtggctagtggacacaaataatcatatatga 746
Query: 548 ttgactgaaaaggaagaaaaa 568
||||||||||||| |||||||
Sbjct: 747 ttgactgaaaagggagaaaaa 767
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 722
Length of database: 1122
Length adjustment: 10
Effective length of query: 712
Effective length of database: 1112
Effective search space: 791744
Effective search space used: 791744
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no451_i18.g1 MSMg01no451_i18.g1 CHROMAT_FILE:
MSMg01no451_i18.g1 PHD_FILE: MSMg01no451_i18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:50 2005
(363 letters)
>mm_chr10_55613876_55614638
Length = 763
Score = 489 bits (253), Expect = e-143
Identities = 258/260 (99%)
Strand = Plus / Minus
Query: 104 ctgaatttggttttcactgcgatactgtaataagtcctcagaactattcttttgaaaaaa 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ctgaatttggttttcactgcgatactgtaataagtcctcagaactattcttttgaaaaaa 406
Query: 164 acactgaacatgtgaaggaacaacacgagatttcatggtatcttcaccccacaaagaaaa 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 acactgaacatgtgaaggaacaacacgagatttcatggtatcttcaccccacaaagaaaa 346
Query: 224 acagcactatgagataacaaggacagatatttaaaaattgaatttgtttccaatgtaggt 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 acagcactatgagataacaaggacagatatttaaaaattgaatttgtttccaatgtaggt 286
Query: 284 gaatgttttccctgcatgtgcatttatgtgccacatgtgtccctatgcaagtcagaangg 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 285 gaatgttttccctgcatgtgcatttatgtgccacatgtgtccctatgcaagtcagaaggg 226
Query: 344 tgatgaatctactggagcca 363
|||||||||| |||||||||
Sbjct: 225 tgatgaatctcctggagcca 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 763
Length adjustment: 9
Effective length of query: 354
Effective length of database: 754
Effective search space: 266916
Effective search space used: 266916
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
