Query= MSMg01no452_o01.b1 MSMg01no452_o01.b1 CHROMAT_FILE:
MSMg01no452_o01.b1 PHD_FILE: MSMg01no452_o01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:34 2005
(631 letters)
>mm_chr10_56203161_56204191
Length = 1031
Score = 1091 bits (564), Expect = 0.0
Identities = 616/634 (97%), Gaps = 3/634 (0%)
Strand = Plus / Plus
Query: 1 ggtgggatatgccagctagcagaaccctgtaactggtagggactcagggatgcagggaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 200 ggtgggatatgccagctagcagaaccctgtaactggtagggactcagggattcagggaga 259
Query: 61 tcctggtggccagtggccactt-aatatgtcaaataggcacctcaaccatttgttatagg 119
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 260 tcctggtggccagtggccactttaatatgtcaaataggcacctcaaccatttgttatagg 319
Query: 120 tttagggcctaacatcccagccttttttatggataataagtaatgcggggcgatgcaatc 179
||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 320 tttagggcctaacatcccaaccttttttatggataataagtaatgtggggcaatgcaatc 379
Query: 180 ttctctgtgactacttactgctgattttggagtatctttgttgggggaagttagaatgct 239
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 380 ttctctgtgactacttactgctgactttggagtatctttgttgggggaagttagaatgct 439
Query: 240 ggccaaggcctggaaaaacaggctgttcgttcactgacctggctctgcaggacccgctgg 299
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 440 ggccaaggcctgtcaaaacaggctgttcgttcactgacctggctctgcaggaccctctgg 499
Query: 300 gtctagggacctacaggcagcagctggagcagtttttgaggctggggctagggaagtgca 359
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 500 gtctagggacctacaggcagcagctggagcagtttttgatgctggggctagggaagtgca 559
Query: 360 ggccacttttaagttattcaggatgcagaatttgagggaacatctggagctggcaaattg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggccacttttaagttattcaggatgcagaatttgagggaacatctggagctggcaaattg 619
Query: 420 ctagggtattctgtagtttgtttgaaatcttccgggacaaatagactagggagagaaggt 479
|||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 620 ctagggtattctctagtttgtttgaaatcttctgggacaaatagactagggagagaaggt 679
Query: 480 aaaatgaaggagtttaggggaaaatttttatcttgggtgttcatttgaaactttcggacc 539
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 680 aaaatgaaggagtttaggggaacatttttatcttgggtgttcatttgaaactttcggacc 739
Query: 540 caaaggcctgacaattagctgagcccaaagagcagaggagagtgagagaga--tcccacc 597
|||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 740 caaaggcctgacaattagctgagcccaaagagcagaggagagagagagagagttcccacc 799
Query: 598 ctctggaataggaggaattggcaaatggggaagg 631
||||| ||||||| ||||||||||||||||||||
Sbjct: 800 ctctgcaataggacgaattggcaaatggggaagg 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no452_o01.g1 MSMg01no452_o01.g1 CHROMAT_FILE:
MSMg01no452_o01.g1 PHD_FILE: MSMg01no452_o01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:34 2005
(574 letters)
>mm_chr10_56362876_56363849
Length = 974
Score = 1071 bits (554), Expect = 0.0
Identities = 569/574 (99%)
Strand = Plus / Minus
Query: 1 ttagtggctttttaactgctttcaggccattgctacagtgccagctaaacttgccccttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 ttagtggctttttaactgctttcaggccattgctacagtgccagctaaacttgccccttt 715
Query: 61 cctggttgtgactttaatgaggcaagggtatgctttgttgggcatgggggctgagtactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 cctggttgtgactttaatgaggcaagggtatgctttgttgggcatgggggctgagtactt 655
Query: 121 cagtggacgtgaatgtgtatcccccaggtgctcgttttggtccggtttgtgtgcttgtgt 180
|||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 654 cagtggtcgtgaatgtgtatcccccaggtgctcattttggtctggtttgtgtgcttgtgt 595
Query: 181 cacattctggcaggcggcaccgaggaaaagcattcaaggctgagaagaaagcttagaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 cacattctggcaggcggcaccgaggaaaagcattcaaggctgagaagaaagcttagaata 535
Query: 241 acatgtcaacaatgtgctgccatggatttgggtttcttcttctttttctggaaaaagaaa 300
||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 534 acatgccaacaatgtgctgccgtggatttgggtttcttcttctttttctggaaaaagaaa 475
Query: 301 aatctaaagtttcttccacgttcccaccaggaaagacttatttctttctacttagtggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 aatctaaagtttcttccacgttcccaccaggaaagacttatttctttctacttagtggca 415
Query: 361 tggaatccctggcatccaggggaactaattgtctcagtctgccagtttcacaaccatgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tggaatccctggcatccaggggaactaattgtctcagtctgccagtttcacaaccatgat 355
Query: 421 aattcataatttccttggttggtaaagtggaatggagtcgaatggcaaaagagaaaataa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 aattcataatttccttggttggtaaagtggaatggagtcgaatggcaaaagagaaaataa 295
Query: 481 ttccctctggaacctgcatttttccaaaaccaaaaaaagttatgctttcaggaggcacag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ttccctctggaacctgcatttttccaaaaccaaaaaaagttatgctttcaggaggcacag 235
Query: 541 gtgtaaagctcttatagccagaacagaacagcag 574
||||||||||||||||||||||||||||||||||
Sbjct: 234 gtgtaaagctcttatagccagaacagaacagcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space: 543696
Effective search space used: 543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
