Query= MSMg01no452_p23.b1 MSMg01no452_p23.b1 CHROMAT_FILE:
MSMg01no452_p23.b1 PHD_FILE: MSMg01no452_p23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:43 2005
(665 letters)
>mm_chr10_24931920_24932979
Length = 1060
Score = 1147 bits (593), Expect = 0.0
Identities = 642/661 (97%), Gaps = 5/661 (0%)
Strand = Plus / Plus
Query: 5 gaattcaagagagttgtgaagagtccgtgttgctgtctgaactcaagcctgacaagttgt 64
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 205 gaattcaagagagttgtgaagagtccgtgttgctgtctgtactcaagcctgacaagttgt 264
Query: 65 gatgtcttcaagttagatcacaatgaacttcttcttgccctttacatacagaccctttcc 124
||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 265 aatgtcttcaagttaggtcacaatgaacttcttcttgtcctttacatacagaccctttcc 324
Query: 125 tctctcttggtcctccaatggatctttgccccctatgtgagcttgtaaatccatggagtt 184
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctctcttggtcctccagtggatctttgccccctatgtgagcttgtaaatccatggagtt 384
Query: 185 aactgacaccttccaggtttcagcacaactgcattatatgacatcaaaaactcaccccca 244
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 385 aactgacaccttccaggtttcagcacaactgcatcatatgacatcaaaaactcaccccca 444
Query: 245 gcaacatcaccccatctcactagaaaggctttacgtgtggaccggccaggaacagagggg 304
| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 445 gtaacatcaccccatctcactagaaaggctttatgtgtggaccggccaggaacagagggg 504
Query: 305 aaaggctggggtgttggaactgatctctatcttgatggcgatgataccttcccagagaat 364
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaagg-----gtgttggaactgatctctatcttgatggcgatgataccttcccagagaat 559
Query: 365 ccacaagtaaaacctccgtcccgtgcatgatctgaatgtgtgtggccttcgcattacaca 424
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 560 ccacaagtaaaacctccgtcccgtgcatgatctgaatgtgtgtggccttcacattacaca 619
Query: 425 tcacagaacagggttttctaaattttatatgatttgacagattaaaaacaaaccaagaag 484
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 620 tcacagaacagggttttctaaattttatatgatgtgacagattaaaaacaaaccaagaag 679
Query: 485 acagttcattgtcacacgctacaatctctactcctatgcacatgatttcctgtaataaaa 544
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 acagttcattgtcacacactacaatctctactcctatgcacatgatttcctgtaataaaa 739
Query: 545 actgtggaaaatactttaagtttaggatgttggcaagattgtggtaatacacttgagatt 604
||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||
Sbjct: 740 actgtggaaaatactttaagtttaggatgttggcaagcttgtggtaatagagttgagatt 799
Query: 605 tctagcattcttcttaccctcttttgtagctggaacgtgagtatggcatctgcaaagtca 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tctagcattcttcttaccctcttttgtagctggaacgtgagtatggcatctgcaaagtca 859
Query: 665 g 665
|
Sbjct: 860 g 860
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1060
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1050
Effective search space: 687750
Effective search space used: 687750
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no452_p23.g1 MSMg01no452_p23.g1 CHROMAT_FILE:
MSMg01no452_p23.g1 PHD_FILE: MSMg01no452_p23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:43 2005
(647 letters)
>mm_chr10_25065281_25066328
Length = 1048
Score = 1168 bits (604), Expect = 0.0
Identities = 637/648 (98%), Gaps = 1/648 (0%)
Strand = Plus / Minus
Query: 1 ttattttgcactttgatttagactgactttgtaaacaagagctattgggatttaagatgt 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 715 ttattttgcactttgatttagactgactttgtaaacaagagctatagggatttaagatgt 656
Query: 61 ctcaaaatttctcaaggagagttcagaaggcaaaggagaagagtttagttagactc-ttc 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 655 ctcaaaatttctcaaggagagttcagaaggcaaaggagaagagtttagttagactcactc 596
Query: 120 aaagaccaaaagaacccaaggcaaagggactacagaacgtgcgttatgaacatgggtacc 179
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 595 aaagaccaaaagaacccaaggcaaagggactacagaacgtgcattatgaacatgggtacc 536
Query: 180 agttttgcttggatcaaacagatgtctgtctatggggagagactaagatagaacactgta 239
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 535 agttttgcttggatcaaacagatatctgtctatggggagagactaagatagaacactgta 476
Query: 240 ttttaataagatgggaatggcctctgattgtctctcctcactcagccacactgccagcct 299
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 475 ttttaataagatgggaatggcctctgattgtctctccccactcagccacactgccagcct 416
Query: 300 gtctctactgttctaagctctttcccaggctgtactgacaagagggtttgatcagattat 359
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 415 gtctctactgttctaagctctttcccaggctgtactgagaagagggtttgatcagattat 356
Query: 360 agagaaacaatgtccttctcatacccttttaactggatatgggagttgggaggcaaaatg 419
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 355 agagaaacaatgtccttctcatacccttttaactagatatgggagttgggaggcaaaatg 296
Query: 420 accttcaagccttggcattggactttatttctcacacagatctaccaccacaattccatg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 accttcaagccttggcattggactttatttctcacacagatctaccaccacaattccatg 236
Query: 480 gaccagttttctcacaagtactaatcaggcctgtcttagggttttactactgtgaacaga 539
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 235 gaccaattttctcacaagtactaatgaggcctgtcttagggttttactactgtgaacaga 176
Query: 540 caccatgaccagggcaactcttaataaaagacagcatttaatttggactggcttacaggt 599
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 caccatgaccaggacaactcttaataaaagacagcatttaatttggactggcttacaggt 116
Query: 600 tcaaaggttcagtccattatcatcaaggtaggagcatggcagcatgca 647
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 tcaaaggttcagtccattatcatcaaggtaggagcatggcagcatgca 68
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1048
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1038
Effective search space: 661206
Effective search space used: 661206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
