Query= MSMg01no454_i05.b1 MSMg01no454_i05.b1 CHROMAT_FILE:
MSMg01no454_i05.b1 PHD_FILE: MSMg01no454_i05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:44 2005
(233 letters)
>mm_chr10_59300571_59301204
Length = 634
Score = 429 bits (222), Expect = e-125
Identities = 231/234 (98%), Gaps = 1/234 (0%)
Strand = Plus / Plus
Query: 1 ggcctctcctggggatatgggtgacaggagctcaagactgggatagggcatgccctcggg 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 ggcctctcctggggatatgggtgacaggagctcaagactgggaaagggcatgccctcggg 260
Query: 61 agggatgtaagaggatgctgacccctgacccatgaggagagcctgtgggcattaatttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agggatgtaagaggatgctgacccctgacccatgaggagagcctgtgggcattaatttaa 320
Query: 121 tagcaacttgttggagtttatgcatccttaagagtcatcctatcatacaataaaaaagtt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 tagcaacttgttggagtttatgcatccttaagagtcatcctatcatacaataaaaaagct 380
Query: 181 ttcaaattgtgattctcctgggggggg-gagattatagaaggtcatgtgacata 233
||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 ttcaaattgtgattctcctggggggggtgagattatagaaggtcatgtgacata 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 634
Length adjustment: 9
Effective length of query: 224
Effective length of database: 625
Effective search space: 140000
Effective search space used: 140000
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no454_i05.g1 MSMg01no454_i05.g1 CHROMAT_FILE:
MSMg01no454_i05.g1 PHD_FILE: MSMg01no454_i05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:44 2005
(346 letters)
>mm_chr10_59455760_59456505
Length = 746
Score = 557 bits (288), Expect = e-163
Identities = 328/350 (93%), Gaps = 16/350 (4%)
Strand = Plus / Minus
Query: 1 attttgttttgagtcttgtgtagtccaggcttgacccctgactccttgagcttcttattc 60
|||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 745 atttcgttttgagtcttgtgtagtccaggcttgacctctgactccttgagcttcttattc 686
Query: 61 tcctcctcctgcctcccaagtgctgagactacagacatagattatttattactctgtctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tcctcctcctgcctcccaagtgctgagactacagacatagattatttattactctgtctg 626
Query: 121 ctttattctgagttggggtccaagcccaatggtgccaactgagctacatccccagccctg 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctttattccgagttggggtccaagcccaatggtgccaactgagctacatccccagccctg 566
Query: 181 tttttttttgtttttttttttttttttacattagtgtaatggaagaggaaaatagaaaca 240
||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttttttttt--------ttttttttttacattagtgtaatggaagaggaaaatagaaaca 514
Query: 241 gattttgc----tgatggaaagcaagaaaccccagtgctcagaaggctgagatgggagaa 296
|| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ga----gcacgctgatggaaagcaagaaaccccagtgctcagaaggctgagatgggagaa 458
Query: 297 ctgctctgagggtgatgatagcctgaactatctagagactgccgtgccag 346
||| |||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 457 ctgttctgagtgtgatgatagcctgaactatctagagactgccatgccag 408
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
