Query= MSMg01no455_h06.b1 MSMg01no455_h06.b1 CHROMAT_FILE:
MSMg01no455_h06.b1 PHD_FILE: MSMg01no455_h06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:58 2005
(245 letters)
>mm_chr10_54593963_54594608
Length = 646
Score = 397 bits (205), Expect = e-115
Identities = 232/241 (96%), Gaps = 1/241 (0%)
Strand = Plus / Minus
Query: 5 gaattcactattacaccttatatggtaaaccttatatgtttgagagttccagtataacta 64
|||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gaattcactagtaaaccttatatggtaaaccttatatgtttgagagttccagtataactc 363
Query: 65 agagtttatagtgaaacccagtaaacataaaaataaaaaacaaacacctagaaaaattgt 124
|||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||
Sbjct: 362 agagtttatagtgaaacccagtaaacataaaaataagaaacaaacacctagagaagttgt 303
Query: 125 tgactacaagtataaaaactgcttaaacaaatacttacaggcaaatgaaaaaa-gggaat 183
||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 302 tgactacaagtgtaaaaactgcttatacaaatacttacaggcaaatgaaaaaaagggaat 243
Query: 184 atttagggtttttggtttttttgtttgtttgttgggaagttttgttttgttttgttttgt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 atttagggtttttggtttttttgtttgtttgttgggaagttttgttttgttttgttttgt 183
Query: 244 t 244
|
Sbjct: 182 t 182
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 646
Length adjustment: 9
Effective length of query: 236
Effective length of database: 637
Effective search space: 150332
Effective search space used: 150332
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no455_h06.g1 MSMg01no455_h06.g1 CHROMAT_FILE:
MSMg01no455_h06.g1 PHD_FILE: MSMg01no455_h06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:58 2005
(632 letters)
>mm_chr10_54430894_54431928
Length = 1035
Score = 1154 bits (597), Expect = 0.0
Identities = 625/635 (98%), Gaps = 3/635 (0%)
Strand = Plus / Plus
Query: 1 ttcccacctgtttgtgagttgacatgaaaacaaaagcaatattcatgtctttaaaaaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcccacctgtttgtgagttgacatgaaaacaaaagcaatattcatgtctttaaaaaact 260
Query: 61 gaatgcttatctttaagtaaattatatttttatgaattccttggtcctattgcttctagg 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 gaatgcttatctttaagtaaattatatttttatgaatcccttggtcctattgcttctagg 320
Query: 121 tttaagcattttactctctctc--aggaaaagaaggtacttctgctataaataaaaatta 178
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttaagcattttactctctctctcaggaaaagaaggtacttctgctataaataaaaatta 380
Query: 179 atttcacagggaatctttaaaaagaatggcttcatagttttaagacacatcaaacgttta 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttcacagggaatctttaaaaagaatggcttcatagttttaagacacatcaaacgttta 440
Query: 239 tgatatctatgattcaaatgctttatgagggcaaaatagatttaacctttgtatttttca 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgatatctatgattcaaatgctttatgagggcaaaatagatttaacctttgtatttttca 500
Query: 299 tgctgaaatacaatggtttcttaaattctgttttcttcaccatttgcatgtctatcattt 358
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 tgctgaaatacaatggtttcttaaattctgttttcttcaccatttgcacgtctatcattt 560
Query: 359 actttaaaggaacataggctccttgaatttttaatgctttattagagactcattgaaaga 418
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actttataggaacataggctccttgaatttttaatgctttattagagactcattgaaaga 620
Query: 419 tttctcatggcacatttctttggaagatatttacaaactaaaagaaaaa-tatagttaag 477
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 621 tttctcatggaacatttctttggaagatatttacaaactaaaagaaaaaatatagttaag 680
Query: 478 ttaatgataaatacacttactattatgggcaacaaattgagaaatacatttactctaaat 537
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttaatgatgaatacacttactattatgggcaacaaattgagaaatacatttactctaaat 740
Query: 538 tttaatttttatcagaagccaagttggcagtgctattgggcatttactgtccatatagtt 597
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 741 tttaatttttatcagaagccaagttggcagtgctactgggcatttactgtccatatagtt 800
Query: 598 ttatagatggaatgtatggctttgatcatgctgaa 632
|||||||||||||| ||||||||||||||||||||
Sbjct: 801 ttatagatggaatgcatggctttgatcatgctgaa 835
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1035
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1025
Effective search space: 637550
Effective search space used: 637550
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
