Query= MSMg01no455_l13.b1 MSMg01no455_l13.b1 CHROMAT_FILE:
MSMg01no455_l13.b1 PHD_FILE: MSMg01no455_l13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:18 2005
(599 letters)
>mm_chr10_92014517_92015515
Length = 999
Score = 1151 bits (595), Expect = 0.0
Identities = 598/599 (99%)
Strand = Plus / Plus
Query: 1 gcttctatacatggaaacttttgtacccttattattatctattttacagataaggaaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcttctatacatggaaacttttgtacccttattattatctattttacagataaggaaacc 260
Query: 61 tggcctggaagagactgagaaaattacccaacaccacacctacaaaaaatgctaatacta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggcctggaagagactgagaaaattacccaacaccacacctacaaaaaatgctaatacta 320
Query: 121 aaattatcttatctctttctgtacaaatggtgcactaaccagtgttcagctctccagtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaattatcttatctctttctgtacaaatggtgcactaaccagtgttcagctctccagtct 380
Query: 181 tgccattcactccccttctgttcaggatgctttcctctcatatccaactggtcaaccctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgccattcactccccttctgttcaggatgctttcctctcatatccaactggtcaaccctt 440
Query: 241 gtgtatctggaagatctaccgtaagtgcctactcttcaataaagtcttccttgacgtaca 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgtacctggaagatctaccgtaagtgcctactcttcaataaagtcttccttgacgtaca 500
Query: 301 ctgacagagcacaccatgcttgttctcttattactttgaatgacagcaagtaagtttaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgacagagcacaccatgcttgttctcttattactttgaatgacagcaagtaagtttaga 560
Query: 361 aatttatgtttaagaccatgaaatagttaaataagtaactataatggaaattactatcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatttatgtttaagaccatgaaatagttaaataagtaactataatggaaattactatcaa 620
Query: 421 aagccatagaaaacatgaataacatgaagcattgttctcaatagaaggggaagaatagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagccatagaaaacatgaataacatgaagcattgttctcaatagaaggggaagaatagaa 680
Query: 481 ggaaggaaagagtggtgtacaggatcctagagaatatgcgtcccactctgtaagacagtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggaaggaaagagtggtgtacaggatcctagagaatatgcgtcccactctgtaagacagtc 740
Query: 541 caagtccaaaactactgatatactcaccatatagaatagtaatgatgagaacatgctca 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 caagtccaaaactactgatatactcaccatatagaatagtaatgatgagaacatgctca 799
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space: 582521
Effective search space used: 582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_l13.g1 MSMg01no455_l13.g1 CHROMAT_FILE:
MSMg01no455_l13.g1 PHD_FILE: MSMg01no455_l13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:18 2005
(423 letters)
>mm_chr10_92146262_92147085
Length = 824
Score = 812 bits (420), Expect = 0.0
Identities = 423/424 (99%), Gaps = 1/424 (0%)
Strand = Plus / Minus
Query: 1 aattctttc-aatatttaaagaaaacagcaagtactaaacaagtgcttacagtattatga 59
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aattctttcaaatatttaaagaaaacagcaagtactaaacaagtgcttacagtattatga 565
Query: 60 aaccggggtgtgatacccaactcaaaaaagccagcaacaccctgctactgaaaggagaca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aaccggggtgtgatacccaactcaaaaaagccagcaacaccctgctactgaaaggagaca 505
Query: 120 gcatccggacaatcccacatcacattttaatagttcaaatccagcagtccattaaatgat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gcatccggacaatcccacatcacattttaatagttcaaatccagcagtccattaaatgat 445
Query: 180 attgctaaaggcaatttcttaaaggtgcaaacttgggataatgaagaaatctaagaaaag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 attgctaaaggcaatttcttaaaggtgcaaacttgggataatgaagaaatctaagaaaag 385
Query: 240 actatcacaaagcaaacgttctttttgtagttgcagaagtatttgacagagccagcattc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 actatcacaaagcaaacgttctttttgtagttgcagaagtatttgacagagccagcattc 325
Query: 300 attcttgatttaaagcccaggtgcaagtgagtatacaaaagcctcatttctgtgtaagca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 attcttgatttaaagcccaggtgcaagtgagtatacaaaagcctcatttctgtgtaagca 265
Query: 360 acatttaatgaggaagttaaatgccacttagaatagcatacaaacatgagttattgagga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acatttaatgaggaagttaaatgccacttagaatagcatacaaacatgagttattgagga 205
Query: 420 atag 423
||||
Sbjct: 204 atag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 824
Length adjustment: 9
Effective length of query: 414
Effective length of database: 815
Effective search space: 337410
Effective search space used: 337410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
