Query= MSMg01no456_n02.b1 MSMg01no456_n02.b1 CHROMAT_FILE:
MSMg01no456_n02.b1 PHD_FILE: MSMg01no456_n02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:46 2005
(371 letters)
>mm_chr10_4012522_4013288
Length = 767
Score = 584 bits (302), Expect = e-171
Identities = 340/356 (95%), Gaps = 9/356 (2%)
Strand = Plus / Minus
Query: 20 tagttttcaaccacagatatttctgctaattctgagggcattactgcttgaatttacatt 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tagttttcaaccacagatatttctgctaattctgagggcattactgcttgaatttacatt 307
Query: 80 ctattagctttgttcctcaactcagaagaatttagaaatagcaagcacagcatacttgct 139
|| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 306 ctgttagctttgttcatcaactcagaagaatttagaaat----agcacagcatacttgct 251
Query: 140 cagtttcatagacagctcttagaaatatatctcttcttcttcttcttcttcttcttcttc 199
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 250 cagtttcatagacagctcttagaaatatatctcctcttcttcttcttcttcttcttcttc 191
Query: 200 ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctcctcc 259
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 190 ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctccttc 131
Query: 260 tcc-tcttcctcctcctcctcctcctcctcctcctcctcctcctcctcctcct---tctt 315
||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 130 tccttc-tcctcctcctcctcctcctcctcctcctcctcctcctcctcctcctccttctt 72
Query: 316 cttcttctggattcctaccatattttaggcttaaatattgaactatgacccttatt 371
||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||
Sbjct: 71 cttcttctggattcctaacatattttaggtttaaatattgaactatgacacttatt 16
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 157
Number of extensions: 40
Number of successful extensions: 40
Number of sequences better than 10.0: 1
Number of HSP's gapped: 36
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 767
Length adjustment: 9
Effective length of query: 362
Effective length of database: 758
Effective search space: 274396
Effective search space used: 274396
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no456_n02.g1 MSMg01no456_n02.g1 CHROMAT_FILE:
MSMg01no456_n02.g1 PHD_FILE: MSMg01no456_n02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:46 2005
(343 letters)
>mm_chr10_3859103_3859845
Length = 743
Score = 663 bits (343), Expect = 0.0
Identities = 343/343 (100%)
Strand = Plus / Plus
Query: 1 ctacaggcatgcacttatttttatgcagttcttccgtggactttggtttatttctctttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctacaggcatgcacttatttttatgcagttcttccgtggactttggtttatttctctttt 260
Query: 61 tcatatgaagcatagcaaggttccaagattaacaactatgctactaataatgcacaggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcatatgaagcatagcaaggttccaagattaacaactatgctactaataatgcacaggag 320
Query: 121 ttggggtgtggctcagtcaggagattacctgctacacaaccatcaggacatggattgggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttggggtgtggctcagtcaggagattacctgctacacaaccatcaggacatggattgggc 380
Query: 181 ttcctgaactcctacaagagctggcagcctatggcaagtgtgcctcatagttttagcact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcctgaactcctacaagagctggcagcctatggcaagtgtgcctcatagttttagcact 440
Query: 241 gaaacaggaaagacatggacctcactagccagccaacctagccaagctggtcagttttag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaacaggaaagacatggacctcactagccagccaacctagccaagctggtcagttttag 500
Query: 301 gtttcttgagagagcccatctaaaatgctaagtggactgtgac 343
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtttcttgagagagcccatctaaaatgctaagtggactgtgac 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
