Query= MSMg01no458_b14.b1 MSMg01no458_b14.b1 CHROMAT_FILE:
MSMg01no458_b14.b1 PHD_FILE: MSMg01no458_b14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:35 2005
(479 letters)
>mm_chr10_56676262_56677141
Length = 880
Score = 876 bits (453), Expect = 0.0
Identities = 473/480 (98%), Gaps = 1/480 (0%)
Strand = Plus / Minus
Query: 1 aagaattagtgtgaattattttccaggaactccaagtttagttcttatatgaagcttgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aagaattagtgtgaattattttccaggaactccaagtttagttcttatatgaagcttgac 621
Query: 61 tatgcttgtttacccagttattaagtgtgggaggattcccagaactctgcagagtcacgt 120
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 620 tatgcttgtttacccagttattaagtgtgggaggattcccagaactctgtagagtcacgc 561
Query: 121 agcgctccttgaccagctggttttggcaagcttacacaaggtttgtacaatacattgcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agcgctccttgaccagctggttttggcaagcttacacaaggtttgtacaatacattgcta 501
Query: 181 aaccaaggagtgaagaaaacctccttatatgcctccagaagtggagacccatgatgacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aaccaaggagtgaagaaaacctccttatatgcctccagaagtggagacccatgatgacag 441
Query: 241 cattgttatttcttaccataagcctgcagacatgtgacctaggctgagatgtattacaac 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cattgttaaaacttaccataagcctgcagacatgtgacctaggctgagatgtattacaac 381
Query: 301 acataatctaacattaatggaaattatttttccagaggagttaatgactcacaatacaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 acataatctaacattaatggaaattatttttccagaggagttaatgactcacaatacaca 321
Query: 361 agcagttatgatgtcatttattgatttaggatgcctttatttcttctctacaataacttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agcagttatgatgtcatttattgatttaggatgcctttatttcttctctacaataacttc 261
Query: 421 tcccataataatttcaaagaanatgttagattgaacctg-aaaaaattatgtattgtcaa 479
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 260 tcccataataatttcaaagaaaatgttagattgaacctgaaaaaaattatgtattgtcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 880
Length adjustment: 10
Effective length of query: 469
Effective length of database: 870
Effective search space: 408030
Effective search space used: 408030
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_b14.g1 MSMg01no458_b14.g1 CHROMAT_FILE:
MSMg01no458_b14.g1 PHD_FILE: MSMg01no458_b14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:35 2005
(562 letters)
>mm_chr10_56526911_56527872
Length = 962
Score = 1025 bits (530), Expect = 0.0
Identities = 554/562 (98%)
Strand = Plus / Plus
Query: 1 ctgcttgagttttgagtctattctctataatccttgtatggatggcataaattatgagag 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgcttgacttttgagtctattctctataatccttgtatggatggcataaattatgagag 260
Query: 61 ttgatgataattatggaatgttttaaaaacaccctaattaaatttacagtaatagctgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgatgataattatggaatgttttaaaaacaccctaattaaatttacagtaatagctgga 320
Query: 121 attttgatgtcccccctcctcctctcttggaaatagtaacttagcattgggctttaggtt 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 attttgatgtcccccctcctcctctcttagaaatagtaacttagcattgggctttaggtt 380
Query: 181 ttaaatttttcagttgcatttacttgtactatcctatttttctgaagaatttgcagttag 240
||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 381 ttaaatttttcagttgcatttacttgtactatcctatatttctgaaggatttgcagttag 440
Query: 241 tcatcttttatattgtcaaaggcctttctcactcactttcagagacgatccaacaaaagc 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcatctggaatattgtcaaaggcctttctcactcactttcagagacgatccaacaaaagc 500
Query: 301 aagcaggcaggagagcagcagaagcagagatgtaaaagctgaggtaatgttctaagccac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagcaggcaggagagcagcagaagcagagatgtaaaagctgaggtaatgttctaagccac 560
Query: 361 atgctatggagcatatggcttgtgtggtcttgcatctaggtccaggtttttatctcattc 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgctatggagcatctggcttgtgtggtcttgcatctaggtccaggtttttatctcattc 620
Query: 421 ctcatgaattgctatgttaaaacgtagagcttgagatattgtgtctgttagtgcattttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctcatgaattgctatgttaaaacgtagagcttgagatattgtgtctgttagtgcattttc 680
Query: 481 tgttatggtcatagaatacccagtaattctggcagttccagtctcggtacagcagcagtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgttatggtcatagaatacccagtaattctggcagttccagtctcggtacagcagcagtc 740
Query: 541 cctgttgcttttgggcctatgg 562
||||||||||||||||||||||
Sbjct: 741 cctgttgcttttgggcctatgg 762
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 962
Length adjustment: 10
Effective length of query: 552
Effective length of database: 952
Effective search space: 525504
Effective search space used: 525504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
