Query= MSMg01no458_m04.b1 MSMg01no458_m04.b1 CHROMAT_FILE:
MSMg01no458_m04.b1 PHD_FILE: MSMg01no458_m04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:26 2005
(617 letters)
>mm_chr10_104935148_104936165
Length = 1018
Score = 1125 bits (582), Expect = 0.0
Identities = 609/618 (98%), Gaps = 1/618 (0%)
Strand = Plus / Minus
Query: 1 aaatataagtccttaactaaagaaaaaacaagacggaataaaacaaagcaagcaaggaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 aaatataagtccttaactaaagaaaaaacaagacggaataaaacaaagcaagcaaggaag 851
Query: 61 gaaggaaggaagcaaacaaacatagaaacaaaacaacccgtcttaatagttctgtcataa 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 850 gaaggaaggaagcaaacaaacatagaaacaaaacaacccgtcttcatagttctgtcataa 791
Query: 121 ttcatgagagagcagagataaatttttgtgttccctctcctgccttcagaaagacaactt 180
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 790 ttcatgagagagcagagataaatttgtgtgttccctctcctgctttcagaaagacaactt 731
Query: 181 ccacttaaaagaaatatatgaagagctgtctggctgcctgtgtcctcacagtgatgcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 ccacttaaaagaaatatatgaagagctgtctggctgcctgtgtcctcacagtgatgcaaa 671
Query: 241 gaattatgctaatgattttcctgttccctaaatgaattttacacgagaaaatagaactaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gaattatgctaatgattttcctgttccctaaatgaattttacacgagaaaatagaactaa 611
Query: 301 catgaatacagcatgatgtattaataccttgtggaatccttttgtgagatatgggggctt 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 610 catgaatacagcatgatgtattaataccttgtggaatccttttgtgagatttgggggctt 551
Query: 361 ctgtagctgaattcatgaatgaaattaggttttggttttcttttttttt-caggctgttt 419
||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 550 ctgtagctgaattcatgaatgaaattagggtttggttttcttttttttttcaggctgttt 491
Query: 420 cctgaattatgttagcatcataaaatgatttgggatgcttttatgttctccgaaacactt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 cctgaattatgttagcatcataaaatgatttgggatgcttttatgttctccgaaacactt 431
Query: 480 tatgtgacagaatatctgtcccttgggttttcatgaatttatctatggaaccatgttagc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tatgtgacagaatatctgtcccttgggttttcatgaatttatctatggaaccatgttagc 371
Query: 540 ccacttctcttcagaaagaattttattgacaactctctattgcttttgtggcaatatgtc 599
||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 370 ccacttctcttcagaaagaatttcattgacaactctctattgcttttgtggcaatctgtc 311
Query: 600 tgctcagtttacttttat 617
||||| ||||||||||||
Sbjct: 310 tgctcggtttacttttat 293
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1018
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1008
Effective search space: 611856
Effective search space used: 611856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_m04.g1 MSMg01no458_m04.g1 CHROMAT_FILE:
MSMg01no458_m04.g1 PHD_FILE: MSMg01no458_m04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:27 2005
(627 letters)
>mm_chr10_104756102_104757128
Length = 1027
Score = 1197 bits (619), Expect = 0.0
Identities = 625/627 (99%)
Strand = Plus / Plus
Query: 1 actctcagagaaaattatagtttcctgaacaagcaaaactataaaacctgaccagctgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actctcagagaaaattatagtttcctgaacaagcaaaactataaaacctgaccagctgac 260
Query: 61 agagcttcacataaaatcaaacagaaggcagctaccataattacagacagaatctggtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagcttcacataaaatcaaacagaaggcagctaccataattacagacagaatctggtat 320
Query: 121 tggaaattatattagggtcttcccgtagaaaattgtcagggggtattttcaaaatctgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggaaattatattagggtcttcccgtagaaaattgtcagggggtattttcaaaatctgag 380
Query: 181 caaagagactacctccatccataatgggaagtaacacaaagagccagacaatggctccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaagagactacctccatccataatgggaagtaacacaaagagccagacaatggctccag 440
Query: 241 ggacacttttatcttctgcctgtgaagactctgtctccatgtaaccaaaggagaggcaga 300
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggacacacttatcttctgcctgtgaagactctgtctccatgtaaccaaaggagaggcaga 500
Query: 301 tcccatggtacaagctcaattctcaatccaatttatttacataaaataattgaatgaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcccatggtacaagctcaattctcaatccaatttatttacataaaataattgaatgaatt 560
Query: 361 ttctgaaatcacaaactgttgagaatactagcacttcccattagcaatcaagagaccaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttctgaaatcacaaactgttgagaatactagcacttcccattagcaatcaagagaccaca 620
Query: 421 tgccgtttgtcactaaggaacttgaaacctaaacccaatttcagcaaagataaacttatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgccgtttgtcactaaggaacttgaaacctaaacccaatttcagcaaagataaacttatt 680
Query: 481 tgacaaatgattaaaaactgggctctacagttatgaataaaatcaaagtaaaatcattct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgacaaatgattaaaaactgggctctacagttatgaataaaatcaaagtaaaatcattct 740
Query: 541 gcctctttagataaggctcaagaagacaatccttccagtattggctctgttatgaaaata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gcctctttagataaggctcaagaagacaatccttccagtattggctctgttatgaaaata 800
Query: 601 gcatgcattaaaatggaaagggctaac 627
|||||||||||||||||||||||||||
Sbjct: 801 gcatgcattaaaatggaaagggctaac 827
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space: 627489
Effective search space used: 627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
