Query= MSMg01no461_d03.b1 MSMg01no461_d03.b1 CHROMAT_FILE:
MSMg01no461_d03.b1 PHD_FILE: MSMg01no461_d03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:42 2005
(245 letters)
>mm_chr10_78567060_78567704
Length = 645
Score = 455 bits (235), Expect = e-132
Identities = 241/243 (99%)
Strand = Plus / Plus
Query: 1 actaagctacatattgaattctaggaccataggaattgataatactcggctgacatagtc 60
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 201 actaagctacatattgaattctaggaccataggaattgataatactaggttgacatagtc 260
Query: 61 tggaattcattgcagtcatcttgtcttggactcctgtgtgttgggatgaaagctgtgtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggaattcattgcagtcatcttgtcttggactcctgtgtgttgggatgaaagctgtgtat 320
Query: 121 catcttgcttggccagagccgtctccctgattcctttcccctcctctctagctgacaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catcttgcttggccagagccgtctccctgattcctttcccctcctctctagctgacaaga 380
Query: 181 tgatcaagcgtcccctttttatcagctgtgaacctacagaagctcgccagagttcctagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgatcaagcgtcccctttttatcagctgtgaacctacagaagctcgccagagttcctagt 440
Query: 241 ttg 243
|||
Sbjct: 441 ttg 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no461_d03.g1 MSMg01no461_d03.g1 CHROMAT_FILE:
MSMg01no461_d03.g1 PHD_FILE: MSMg01no461_d03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:42 2005
(349 letters)
>mm_chr10_78813223_78813970
Length = 748
Score = 576 bits (298), Expect = e-169
Identities = 337/350 (96%), Gaps = 3/350 (0%)
Strand = Plus / Minus
Query: 1 tgtgaaagtagatgttccttgacataatgattcttaaacaatcaaaaactgaggcata-g 59
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 434 tgtgaaagtagatgttccttgacataatgattcttaaacaat-aaaaactgaggcatagg 376
Query: 60 tgggacagcacatcataaccctaatggcctaggtgcatgcagaaacagtggatctggaaa 119
|||||||||||||||||||||||||||| ||||||| | ||||||||||| ||||| ||
Sbjct: 375 ggggacagcacatcataaccctaatggcccaggtgcaggtagaaacagtggttctgg-aa 317
Query: 120 aaataatctaacagcccagtaggtgctcttattttaggaacaatgtaataactacaccat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 316 aaataatctaacagcccagtaggtgctcttattttaggaacaatgtaataactgcaccat 257
Query: 180 ggcagttctggattaatttttggctatcagtgaaagtttgaagaaattatgttcagaaat 239
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ggcagttctggattaatgtttggctatcagtgaaagtttgaagaaattatgttcagaaat 197
Query: 240 aaattattaaaattaaacagccatgcactgctaaatttatacagagtccaccaccagaaa 299
|||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 196 aaattaagaaaattaaacagccatacactgctaaatttatacagagtccaccaccagaaa 137
Query: 300 gtgaagaaatgtactggaatttgaaaaatctttagtatgagagacacatt 349
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 gtgaagaaatgtactggaatttgaaaaatctttagtatgagagacacatt 87
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 748
Length adjustment: 9
Effective length of query: 340
Effective length of database: 739
Effective search space: 251260
Effective search space used: 251260
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
