Query= MSMg01no463_n05.b1 MSMg01no463_n05.b1 CHROMAT_FILE:
MSMg01no463_n05.b1 PHD_FILE: MSMg01no463_n05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:23 2005
(467 letters)
>mm_chr10_108133058_108133924
Length = 867
Score = 770 bits (398), Expect = 0.0
Identities = 431/442 (97%), Gaps = 1/442 (0%)
Strand = Plus / Minus
Query: 27 actgctgtagcacagtggttcacagccttctcaatgctgagaccctgtaatataatagtt 86
||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 867 actgctgtagcacagcggttcacagccttctgaatgctgagaccctgtaatataatagtt 808
Query: 87 cctcatgttgtggtgcccccaaccataacattattttcattgctacttcata-aagtaag 145
||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||
Sbjct: 807 cctcatgttgtggtgcctccaaccataacattattttcattgctacttcatacatgtaag 748
Query: 146 tttgctactgttctgattcataatgtttgaaccataatcatctgaatttttatggtctca 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 tttgctactgttctgattcataatgtttgaaccataatcatctgaatttttatggtctca 688
Query: 206 ggcaacccctgtgaaagggtttccttaccccacacccaaagttctatcgcagctctgggt 265
||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 687 ggcaacccctgtgaaagggtttccttaccccccacccaaagggctatcgcagctctgggt 628
Query: 266 gagacatctgggtttggaatcctggctctgcaaagcaaacatgtgtttgttcttgtttgt 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gagacatctgggtttggaatcctggctctgcaaagcaaacatgtgtttgttcttgtttgt 568
Query: 326 attctctggacacatcagagtgtttcataacttatatacttagataatagttcgattggc 385
||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 567 attctctagacacatcagagtgtttcataacttatatacttagataatagttctattggc 508
Query: 386 ctgactacatttttcattcattattattattttagatgcatgttgtattctaatgaaaga 445
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 cttactacatttttcattcattattattattttagatgcatgttgtattctaatgaaaga 448
Query: 446 aagaaagtcctgtgtatttggg 467
||||||||||||||||||||||
Sbjct: 447 aagaaagtcctgtgtatttggg 426
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no463_n05.g1 MSMg01no463_n05.g1 CHROMAT_FILE:
MSMg01no463_n05.g1 PHD_FILE: MSMg01no463_n05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:23 2005
(355 letters)
>mm_chr10_107982543_107983301
Length = 759
Score = 629 bits (325), Expect = 0.0
Identities = 349/359 (97%), Gaps = 4/359 (1%)
Strand = Plus / Plus
Query: 1 catacataggtcacttcttcagacccacccaataaatctgggcggggcagatactattat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catacataggtcacttcttcagacccacccaataaatctgggcggggcagatactattat 260
Query: 61 ttttgttttgctgggaaacggtgactcaacacagtaattcacctcagtcctttgtatttc 120
||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 ttttgttttgctgggaagcggtgactcaacacagtaactcacctcagtcctttgtatttt 320
Query: 121 tttctgtgaagtcatgttagatccataaatatcaagagtaattctggaatagaggagtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttctgtgaagtcatgttagatccataaatatcaagagtaattctggaatagaggagtgg 380
Query: 181 gtggagagagaatttttcatctgatgggatggagtatgactaatgtatttttgaaggaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtggagagagaatttttcatctgatgggatggagtatgactaatgtatttttgaaggaaa 440
Query: 241 tctcggtctccaacagtaggcagaa----ctaggtatattccaatcatctgggatagaga 296
|||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 441 tctcgggctccaacagtaggcagaaagaactaggcatattccaatcatctgggatagaga 500
Query: 297 actggatcaagtaaagtcttgagttttactcagttcattttgctttgcggagtagaact 355
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 actggatcaagtaaagtcttgagttttactcagttcattttgctttgtggagtagaact 559
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 355
Length of database: 759
Length adjustment: 9
Effective length of query: 346
Effective length of database: 750
Effective search space: 259500
Effective search space used: 259500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
