Query= MSMg01no463_n15.b1 MSMg01no463_n15.b1 CHROMAT_FILE:
MSMg01no463_n15.b1 PHD_FILE: MSMg01no463_n15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:25 2005
(539 letters)
>mm_chr10_79315321_79316259
Length = 939
Score = 1004 bits (519), Expect = 0.0
Identities = 534/539 (99%)
Strand = Plus / Plus
Query: 1 aaagttgagaatttgtctcaaaaacaattctagctgggcatggtggcacacacctttgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagttgagaatttgtctcaaaaacaattctagctgggcatggtggcacacacctttgat 260
Query: 61 tccagcactcaggaagcaggggcagtggatctatgtgaggccagcctcaggctgggtctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccagcactcaggaagcaggggcagtggatctatgtgaggccagcctcaggctgggtctc 320
Query: 121 tgcagcgcaggggttgggattcggaattaaatgttccccactgggtaatggaggtctgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcagcgcaggggttgggattcggaattaaatgttccccactgggtaatggaggtctgat 380
Query: 181 tcggatcaggaagcagataaggaattgaaggtgaacaagaccattcagtggttccgggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcggatcaggaagcagataaggaattgaaggtgaacaagaccattcagtggttccgggaa 440
Query: 241 gcaaggtgtgttggggctggccattaactcaggaggcagatctctgggccttagaggcca 300
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcaaggcgtggtggggctggccattaactcaggaggcagatctctgggccttagaggcca 500
Query: 301 gcaggagttcggtatagccagggctacacacaaaccgttttcataaggtaggttctggga 360
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 gcaggagttcggtatagccagggctacacacaaaccgttttcataagaaaggttctggga 560
Query: 361 ggtctctgaaatggctttcaacaaactctgctagtgtagacctgtgctccttggacatga 420
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 561 ggtctctgaaatggctttcaacaaactctgctagtgtagacctgtgcttcttggacatga 620
Query: 421 gcagcctccaacttcactggcagccacccgtgcaggttagcttctgagggtggggctcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcagcctccaacttcactggcagccacccgtgcaggttagcttctgagggtggggctcct 680
Query: 481 gcttggcaccagccacccagagaacaaaaactggcagccaaccttatccctgatggtcc 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcttggcaccagccacccagagaacaaaaactggcagccaaccttatccctgatggtcc 739
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 939
Length adjustment: 10
Effective length of query: 529
Effective length of database: 929
Effective search space: 491441
Effective search space used: 491441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no463_n15.g1 MSMg01no463_n15.g1 CHROMAT_FILE:
MSMg01no463_n15.g1 PHD_FILE: MSMg01no463_n15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:25 2005
(502 letters)
>mm_chr10_79445963_79446869
Length = 907
Score = 922 bits (477), Expect = 0.0
Identities = 498/507 (98%), Gaps = 5/507 (0%)
Strand = Plus / Minus
Query: 1 ttcgttctgctcaaggtgacctctgacccctgacctctgacccctggccccagctgtcat 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 707 ttcgttctgctcaaggtgacctctgacccctgacctctgacccctgaccccagctgtcat 648
Query: 61 ccgctcgcccacccccggcaactttaccacttggctcctgacgcctggataccctgatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 ccgctcgcccacccccggcaactttaccacttggctcctgacgcctggataccctgatac 588
Query: 121 cactcttacagatgctatctctggtcctcacttcctcagctctcaggccccgcctcctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 cactcttacagatgctatctctggtcctcacttcctcagctctcaggccccgcctcctgc 528
Query: 181 cctttggcctcagtctgccacttgggagcctaggccccaaatttttccactcaagaccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 cctttggcctcagtctgccacttgggagcctaggccccaaatttttccactcaagaccag 468
Query: 241 agcccattgtcctcttggagtaggattttggactcgaggtccaccttcccacctgtcact 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 agcccagtgtcctcttggagtaggattttggactcgaggtccaccttcccacctgtcact 408
Query: 301 cccatcctgtcctgcacctccactgagaacagtatggtcatttccattccat-cctgact 359
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 407 cccatcctgtcctgcacctccactgagaacaatatggtcatttccattccattcctgact 348
Query: 360 ttccactgtagaccacctcctgtgctggaggccctgtcccgcctgtcatttctattctac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ttccactgtagaccacctcctgtgctggaggccctgtcccgcctgtcatttctattctac 288
Query: 420 cctgattc----agtccagtctctactagtcagtcccattccaacacaccctgaaccaac 475
|||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 287 cctgattctctcagtccagtctctactagtcagtcccattccagcacaccctgaaccaac 228
Query: 476 cccctggggacagccccctacccccca 502
|||||||||||||||||||||||||||
Sbjct: 227 cccctggggacagccccctacccccca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 907
Length adjustment: 10
Effective length of query: 492
Effective length of database: 897
Effective search space: 441324
Effective search space used: 441324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
