Query= MSMg01no463_p06.b1 MSMg01no463_p06.b1 CHROMAT_FILE:
MSMg01no463_p06.b1 PHD_FILE: MSMg01no463_p06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:33 2005
(494 letters)
>mm_chr10_3212921_3213813
Length = 893
Score = 893 bits (462), Expect = 0.0
Identities = 486/494 (98%), Gaps = 2/494 (0%)
Strand = Plus / Plus
Query: 1 tacaaagtgagttccaggctagccagggctacaaagtgagaccttgcctttaaaaggtcc 60
|||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 201 tacaaagtgagttccaggctagccagggctacaaagtgagacctcgtctttaaaaggtcc 260
Query: 61 ttaaatcttagaccacagttcatttatagagctgcctgtgatttttattttgcatcttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaatcttagaccacagttcatttatagagctgcctgtgatttttattttgcatcttca 320
Query: 121 ggtgaaagctgtgtgtctgagcgctttgtaacagctgaatccacaggtgtagaggcagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtgaaagctgtgtgtctgagcgctttgtaacagctgaatccacaggtgtagaggcagct 380
Query: 181 gtatccacaggtgtagaggcagctgtattcacaggtgtagaggcagctgtatccacaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtatccacaggtgtagaggcagctgtattcacaggtgtagaggcagctgtatccacaggt 440
Query: 241 gtagatactattattgtaactcagcagcaccaaggagagactggagcatgtggggcacgt 300
|||||||| | | || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtagataccag-agtggaactcagcagcaccaaggagagactggagcatgtggggcacgt 499
Query: 301 gactaagtcagttaggttttaaaatgaaagagaggcagcccagcagttaagagcactggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gactaagtcagttaggttttaaaatgaaagagaggcagcccagcagttaagagcactggc 559
Query: 361 tgctcttccggaggactcaggctccattcccagctcccacacagaagctctcgccttctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tgctcttccggaggactcaggctccattcccagctcccacacagaagctctcgccttctg 619
Query: 421 taattccagttcaggagatccgacactttttttctggcctccacagtcactgcacacaca 480
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 620 taattccagttcaggagatccgacactttttt-ctggcctccacagtcactgcacacaca 678
Query: 481 tggtgagctgacac 494
||||||||||||||
Sbjct: 679 tggtgagctgacac 692
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 893
Length adjustment: 10
Effective length of query: 484
Effective length of database: 883
Effective search space: 427372
Effective search space used: 427372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no463_p06.g1 MSMg01no463_p06.g1 CHROMAT_FILE:
MSMg01no463_p06.g1 PHD_FILE: MSMg01no463_p06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:33 2005
(493 letters)
>mm_chr10_3429104_3429996
Length = 893
Score = 922 bits (477), Expect = 0.0
Identities = 489/493 (99%)
Strand = Plus / Minus
Query: 1 tctaacatatggcaactgctaacaaaccagtatgggggaaataccttcattcccttttcc 60
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 608 tctaacatatggcaactgctaacaaaccagtatggggaaaataccttcattctcttttcc 549
Query: 61 tctctaccagaagaaataccttcccaacaagctgtttgaaaaagcacctagattttcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tctctaccagaagaaataccttcccaacaagctgtttgaaaaagcacctagattttcttg 489
Query: 121 gtcattctctgtgtaattcaaaactgattactacggggtctctttattcttagattaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gtcattctctgtgtaattcaaaactgattactacggggtctctttattcttagattaaaa 429
Query: 181 gagccgctgtctcctagattcctcagcccatgaattcccagggtagcacttagacaggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gagccgctgtctcctagattcctcagcccatgaattcccagggtagcacttagacaggga 369
Query: 241 cgagaaatgtatccttcctcccataactctgcttattaatccttgagggaaactcagtct 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 cgagaaatgcatccttcctcccataactctgcttattaatccttgagggaaactcagtct 309
Query: 301 gcaggcttacctcttgggaaagaatgtaaatggaattttactatctctagtgccttggaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gcaggcttacctcttgggaaagaatgtaaatggaattttactatctctagtgccttggaa 249
Query: 361 gacatgattgtcacagagaggagagagttatttccacatctttttagaattattattatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gacatgattgtcacagagaggagagagttatttccacatctttttagaattattattatt 189
Query: 421 gttgttctattattatttttattgcactgtgaggtttctggggacacacatgtgctacag 480
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 188 gttgttctattattatttttattgtactgtgaggtttctggggacacacatgtgctacag 129
Query: 481 tatacttgcagag 493
|||||||||||||
Sbjct: 128 tatacttgcagag 116
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 893
Length adjustment: 10
Effective length of query: 483
Effective length of database: 883
Effective search space: 426489
Effective search space used: 426489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
