Query= MSMg01no464_l03.b1 MSMg01no464_l03.b1 CHROMAT_FILE:
MSMg01no464_l03.b1 PHD_FILE: MSMg01no464_l03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:33 2005
(275 letters)
>mm_chr10_6652546_6653220
Length = 675
Score = 484 bits (250), Expect = e-141
Identities = 253/254 (99%)
Strand = Plus / Minus
Query: 22 gaaatatgagaagaatgatataacaaccaacccagagaagtgacagatacagggacagag 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gaaatatgagaagaatgatataacaaccaacccagagaagtgacagatacagggacagag 416
Query: 82 tcaggcagaatgagacagagtctatggtgagaacaagttatcatgtgtaacagactccat 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tcaggcagaatgagacagagtctatggtgagaacaagttatcatgtgtaacagactccat 356
Query: 142 ctctcttgtttctttaatttgagacaccacattatctcttcctctctgttttaaaatgct 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ctctcttgtttctttaatttgagacaccacattatctcttcctctctgttttaaaatgct 296
Query: 202 tgtatcgtagatcaatatggatacaattagattgaaaacaaagccatccttatttctgag 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tgtatcgtagatcaatatggatacaattagattgaaaacaaagccatccttatttctgag 236
Query: 262 tttgggacatcagg 275
||| ||||||||||
Sbjct: 235 tttaggacatcagg 222
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 275
Length of database: 675
Length adjustment: 9
Effective length of query: 266
Effective length of database: 666
Effective search space: 177156
Effective search space used: 177156
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no464_l03.g1 MSMg01no464_l03.g1 CHROMAT_FILE:
MSMg01no464_l03.g1 PHD_FILE: MSMg01no464_l03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:33 2005
(242 letters)
>mm_chr10_6489719_6490360
Length = 642
Score = 445 bits (230), Expect = e-129
Identities = 239/242 (98%)
Strand = Plus / Plus
Query: 1 attctttctaccttcttgataccaggcgttgaattgatcctacacggctttgtaccaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctttctaccttcttgataccaggcgttgaattgatcctacacggctttgtaccaagg 260
Query: 61 acctttacctgcaaagccgttcaggcccttttgtgtatgtttgtgtacaactgtatgtgt 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 acctttacctgcaaagccgttcaggtccttttgtgtatgtttgtgtacaactgtatgtgt 320
Query: 121 gtgcatacatacgtgttcacatgtgcatgtgagcgtgttgagtaagaggtgggttttgac 180
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtacatacatacgtgttcacatgcgcatgtgagcgtgttgagtaagaggtgggttttgac 380
Query: 181 tgtttccctctattgagatccacctgatttttttgagtcagggtctcttactcaacctgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtttccctctattgagatccacctgatttttttgagtcagggtctcttactcaacctgg 440
Query: 241 ag 242
||
Sbjct: 441 ag 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
