Query= MSMg01no468_b05.b1 MSMg01no468_b05.b1 CHROMAT_FILE:
MSMg01no468_b05.b1 PHD_FILE: MSMg01no468_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:08 2005
(495 letters)
>mm_chr10_18492545_18493439
Length = 895
Score = 913 bits (472), Expect = 0.0
Identities = 487/492 (98%), Gaps = 2/492 (0%)
Strand = Plus / Minus
Query: 5 gaattccaaatagtaatttggcctgccatttgggcaaaggtaaaagataagagtaggcct 64
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 gaattccaaatagtaagctggcctgccatttgggcaaaggtaaaagataagagtaggcct 636
Query: 65 agcatgaatacagggagacatct-aacatctctagtaggtaaaacagcagccagccacag 123
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 635 agcatgaatacagggagacatctgaa-atctctagtaggtaaaacagcagccagccacag 577
Query: 124 tgtcctaaggggctcaatccgccctcctcctctcaccatctgaaaagtgaattgggaggt 183
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tgttctaaggggctcaatccgccctcctcctctcaccatctgaaaagtgaattgggaggt 517
Query: 184 ttgctaacctgttaagggccatcagagtacagagaagatatctaagtcttcttgatgaat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ttgctaacctgttaagggccatcagagtacagagaagatatctaagtcttcttgatgaat 457
Query: 244 gtcctgcttccttcagctggagatagcctggcagtatgctgcctttcctgtccatgacta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gtcctgcttccttcagctggagatagcctggcagtatgctgcctttcctgtccatgacta 397
Query: 304 cattgttggtactcttgtcattccacacattcaaactgaacggcccagcttaacattaca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 cattgttggtactcttgtcattccacacattcaaactgaacggcccagcttaacattaca 337
Query: 364 aactctattttgatttcagactccattttataattatcttgccacctgaatggactcagc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 aactctattttgatttcagactccattttataattatcttgccacctgaatggactcagc 277
Query: 424 tactggaaaaaacccaacttgttccaggagcagtgttaccctggtaacaatcacaattcc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tactggaaaaaacccaacttgttccaggagcagtgttaccctggtaacaatcacaattcc 217
Query: 484 cctgggcaagta 495
||||||||||||
Sbjct: 216 cctgggcaagta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space: 429225
Effective search space used: 429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no468_b05.g1 MSMg01no468_b05.g1 CHROMAT_FILE:
MSMg01no468_b05.g1 PHD_FILE: MSMg01no468_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:08 2005
(419 letters)
>mm_chr10_18294787_18295604
Length = 818
Score = 571 bits (295), Expect = e-167
Identities = 313/319 (98%), Gaps = 3/319 (0%)
Strand = Plus / Plus
Query: 1 ctaagaacaagtctagaaacgaaaactagtcattgtgcttttatggaaatggttccaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaagaacaagtctagaaacgaaaactagtcattgtgcttttatggaaatggttccaagg 260
Query: 61 ccctttcacttgggtagattgcttttgttttcactttaattggcttggtgtgtagtcctt 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 ccctttcacttgggtagattgcttttgttttcactttaaatggcttggtgtgtagtcctt 320
Query: 121 caaattaaaaaacctaatgtttgtggattgggtctgctatgcttcatgaggtataacatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaattaaaaaacctaatgtttgtggattgggtctgctatgcttcatgaggtataacatt 380
Query: 181 gaagaatatctgtagtgcccttataatgtagaaatttgaggaccatagcctgaaacattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaagaatatctgtagtgcccttataatgtagaaatttgaggaccatagcctgaaacattg 440
Query: 241 attgtttggtctgtttgtttgaatccaaacaaactctcaaaaaagcaggtat-ttttttg 299
||||| |||||| |||| ||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 441 attgtctggtct-tttggttgaatccaaacaaactctcaaaaa-gcaggtatattttttg 498
Query: 300 tatttaaacacatcataga 318
|||||||||||||||||||
Sbjct: 499 tatttaaacacatcataga 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 818
Length adjustment: 9
Effective length of query: 410
Effective length of database: 809
Effective search space: 331690
Effective search space used: 331690
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
